Protein

View in Explore
Genbank accession
ARV76830.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MYMTRDYLKVDPWSAVIEMINNEYGVELNPSSTSLVSLESLGGTKTKLKLRVNWGKSPDDTQPKPELPEYFFYDRIDLATLFKGGPIYVMDNVRMPMSTFQIMGMLDKKNDVVFSYTDLVPDQFDRFDEPYKLVAGAQSLRFVGEIPFSFENTLRYDLSSIVLTTELPKANTWQFGNDGTKITGNYLFTAYDFTHYRDELIPAKSNHLFVDTNSLRGMIKHITKQDWILSGNPEDNNLCYSIYEGEKRVRVVYNGVIDPAFTSRTDMSYVMVLELSNTLCTNVSGFLLFHYN
Physico‐chemical
properties
protein length:292 AA
molecular weight: 33562,75570 Da
isoelectric point:5,01436
aromaticity:0,13014
hydropathy:-0,29315

Domains

Domains [InterPro]
IPR057701
STR
70–292
IPR057701
ARV76830.1
1 292
Architecture
STR
STR 70-292
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARV76830.1
1 292
Domain Start End Length (AA) Confidence
N-terminal 1 160 160 0,7395
Central domain 161 281 122 0,5332
C-terminal 282 292 10 0,7019
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-160
Central
161-281
C-terminal
282-292

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Phabio
[NCBI] 		2006668 Uroviricota > Caudoviricetes > Chimalliviridae > Phabiovirus phabio >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARV76830.1 [NCBI]
Genbank nucleotide accession
MF042360 [NCBI]
CDS location
range 138528 -> 139406
strand -
CDS
ATGTACATGACTCGCGATTATCTAAAGGTCGATCCATGGTCCGCTGTAATCGAGATGATTAACAATGAGTACGGGGTGGAGTTAAATCCATCCTCTACTTCCCTTGTTTCTCTCGAATCACTTGGTGGTACCAAGACCAAACTTAAGTTGCGTGTAAACTGGGGGAAATCTCCTGACGACACTCAACCGAAACCTGAACTACCCGAATACTTTTTCTATGATCGTATTGACTTAGCCACTTTGTTTAAAGGTGGTCCTATTTACGTGATGGACAATGTTCGAATGCCTATGTCAACTTTCCAGATTATGGGAATGCTTGATAAGAAGAATGATGTTGTATTTAGTTATACCGACTTAGTTCCTGATCAGTTTGATCGTTTTGATGAACCTTACAAATTGGTAGCTGGTGCTCAATCACTACGGTTTGTTGGTGAGATCCCTTTTAGTTTTGAGAACACCTTACGCTATGATCTTAGTTCCATTGTACTGACTACAGAATTACCAAAGGCCAATACATGGCAGTTCGGTAATGACGGTACAAAAATTACAGGTAACTATCTGTTCACGGCTTATGACTTTACTCACTATCGTGATGAACTAATTCCAGCTAAATCGAACCATCTCTTTGTTGATACTAACTCTTTACGTGGTATGATCAAACACATCACCAAACAGGATTGGATTCTCTCTGGTAATCCAGAAGATAACAACCTATGTTATTCAATCTACGAAGGTGAGAAACGAGTACGTGTTGTTTACAACGGTGTTATTGATCCGGCATTCACGAGTCGAACAGACATGTCTTACGTGATGGTATTGGAACTATCTAATACGCTCTGTACAAACGTATCTGGTTTCCTGCTATTCCATTACAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4624993934ddae4248a77e6a21d49a5c45eb08e0f64754cfb5e1beb989568b05
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5674
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50