Protein

View in Explore
Genbank accession
CAM0037505.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAREFSLDDRVWAINGDRTDPDTVTTSEANLLNVADGHIDSQGPFSDIMNWEQYRVSHMLNAMEQHGVLEWSAKTKYGTRGLCVDNNGQLMQSRKPNNINHPLSDTSWWIEYVPTGMGDMLASVYDINGNGIVDKASSVDGVTGSGNSTYYGKDSTGNIGFHAIPPDGDMKKSVYDTNDNGRVDNADSVFGVDSAGADKYYGTDTNGTEGFFDLPPKGDMLKSVYDTTDTGRVDIAESIFGIAAAKPLTYYGKDKDGSDGFFEFISQLPETATRWPTAFEIGALDVLGQAADSALLDSKVLSEDATADTVVQRDGSGDISARLFRSNFATQTAAPASSAGICFRTNPSSDNYMRFVTKAGMKSWLGYTKAQLGLGSVQNYPVSHIASGAANSKSKYASEYAVGVAWKLAKQAYDATLVGGKVDSAQTADKLSVSRVIALNGDVVGSVNFDGSQNVNMSTSVADNSHKHVWANITDSPIYTKRWPTAAEVGVRTDAQNDAQFISRANGYSRDEIEFIIRKKFNVTKGNAVYDVKDEDLIGNGGVANRLFAPGSKNAPWSGYGYSVIPAKYNKDNYFQWALPYNDAGHLSFRCQANGIDFGWRRVYHEGHKPTAADVGAYSRTESNTYYAPKTHTHRLAQISDIATQTPEYATSLGSTDLNDLKSPSNAGFYYQSGNANATVARHYPLNAAGSLLVQKAAGITQTYIHYFDGRMWVRSFYNGNWSDWAQMYDTRRKPDAAAVGALPISGGTVKGNMGASNEVRGKLGRFSSDSASSQLVLKRTTASSNVGIRFETNDINNFAYLSMRPDGNLALGKNLNSASNPVLYTAANKPTAADVGAEPTLDALRKRKITVGTGTPSGGSDGDIYLQYK
Physico‐chemical
properties
protein length:870 AA
molecular weight: 94014,61370 Da
isoelectric point:5,81459
aromaticity:0,10000
hydropathy:-0,47690

Domains

Domains [InterPro]
DC_1903
ATT
14–850
DC_1903
cd19958
STR
650–729
cd19958
CAM0037505.1
1 870
Architecture
ATT
ATT 14-850 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0037505.1
1 870
Domain Start End Length (AA) Confidence
N-terminal 1 509 509 0,9923
Central domain 510 755 247 0,0741
C-terminal 756 870 114 0,8984
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-509
Central
510-755
C-terminal
756-870

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D82
[NCBI] 		3105326 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0037505.1 [NCBI]
Genbank nucleotide accession
OZ196246.1 [NCBI]
CDS location
range 43936 -> 46548
strand +
CDS
ATGGCTAGAGAGTTTAGTTTAGACGATCGCGTTTGGGCGATTAATGGCGATCGAACAGATCCGGACACAGTAACAACGTCGGAGGCGAATCTATTAAATGTGGCTGATGGTCACATTGATAGCCAAGGGCCATTCTCAGACATTATGAACTGGGAACAATACCGTGTAAGTCACATGCTTAACGCTATGGAACAACACGGGGTCTTGGAATGGTCTGCAAAAACCAAATACGGCACTCGCGGTTTATGTGTTGATAACAACGGTCAACTCATGCAATCCAGAAAGCCGAACAACATCAACCACCCATTGTCTGATACGTCTTGGTGGATTGAGTACGTTCCAACTGGCATGGGTGACATGCTTGCGTCCGTGTATGACATCAATGGTAATGGCATCGTCGATAAAGCTTCATCTGTCGACGGCGTTACTGGATCTGGTAACAGCACTTACTACGGCAAAGATTCAACCGGAAACATCGGTTTTCACGCTATCCCGCCAGATGGTGATATGAAAAAATCCGTTTATGACACTAACGATAATGGTCGCGTCGATAACGCTGATTCTGTTTTTGGTGTGGACAGTGCTGGTGCTGATAAATATTACGGTACCGACACGAACGGTACGGAAGGTTTCTTTGATCTTCCACCAAAAGGCGACATGCTTAAAAGTGTGTACGACACCACAGATACCGGACGAGTTGATATAGCTGAGTCTATCTTCGGCATCGCTGCTGCAAAACCTTTAACTTACTATGGTAAAGACAAAGACGGATCCGATGGCTTTTTTGAATTCATTTCTCAACTTCCAGAAACCGCGACTCGATGGCCAACCGCTTTTGAAATTGGCGCGTTAGATGTCCTCGGCCAAGCGGCTGATTCTGCTTTGCTTGATAGTAAAGTCTTGTCAGAAGACGCCACTGCGGACACCGTAGTTCAACGAGATGGTTCTGGAGATATCAGTGCTCGTTTGTTTCGTTCTAACTTCGCAACTCAAACTGCAGCACCCGCATCTAGTGCTGGTATATGTTTCCGAACTAATCCTAGTTCTGATAACTACATGCGCTTTGTTACTAAAGCTGGCATGAAGTCTTGGCTTGGATACACAAAAGCTCAACTTGGATTGGGGAGCGTCCAAAACTACCCGGTCAGTCACATCGCATCTGGTGCAGCAAACTCAAAATCTAAATACGCATCCGAATATGCAGTCGGTGTTGCGTGGAAACTGGCGAAGCAAGCTTATGATGCGACGCTTGTTGGCGGTAAGGTAGACAGTGCTCAAACTGCAGATAAATTATCGGTCTCTCGCGTCATTGCATTAAACGGTGATGTGGTTGGTTCAGTTAACTTTGATGGCTCTCAAAACGTCAACATGTCGACTAGCGTTGCTGATAACTCTCATAAACATGTGTGGGCTAATATTACTGATTCGCCGATTTATACTAAGCGTTGGCCGACTGCGGCTGAGGTTGGTGTTAGAACGGACGCTCAGAATGATGCTCAATTCATCTCTCGGGCTAATGGTTACTCTAGGGATGAAATTGAATTTATAATCCGCAAAAAATTCAACGTTACGAAAGGTAATGCAGTATACGATGTAAAAGATGAAGATCTTATAGGTAATGGTGGTGTTGCGAATAGACTGTTCGCTCCGGGATCCAAAAACGCTCCTTGGAGTGGTTATGGTTATTCAGTAATACCTGCTAAGTATAATAAGGATAATTACTTCCAATGGGCCTTACCTTATAATGACGCAGGTCATTTATCATTTAGATGTCAAGCTAATGGTATAGATTTCGGTTGGCGCAGGGTATACCACGAAGGTCATAAACCAACAGCGGCAGATGTAGGAGCTTACTCTAGAACTGAATCCAATACTTATTATGCACCTAAGACACATACACACCGATTAGCTCAAATCTCTGATATAGCCACACAGACTCCTGAGTATGCGACTTCATTAGGGTCTACTGACCTTAATGACTTAAAGTCCCCTAGTAATGCAGGGTTCTATTACCAGTCTGGTAACGCAAATGCTACAGTTGCCCGTCATTACCCTTTGAATGCGGCAGGTTCCCTGTTGGTTCAAAAGGCAGCTGGTATAACTCAAACATACATCCATTACTTTGATGGACGTATGTGGGTTCGTTCTTTCTATAATGGTAATTGGTCTGATTGGGCGCAGATGTATGATACCCGTAGAAAACCTGATGCTGCCGCTGTGGGTGCTTTGCCTATTTCCGGTGGCACTGTGAAGGGTAACATGGGCGCAAGTAATGAAGTGCGTGGTAAGTTGGGTCGGTTCTCATCTGACAGCGCTTCTAGTCAGTTAGTGTTAAAACGCACTACAGCTAGTTCTAATGTGGGGATTCGGTTTGAGACTAATGATATTAATAACTTTGCTTATCTATCAATGAGACCGGATGGTAATTTAGCGTTAGGTAAGAACCTAAACTCAGCTAGTAACCCCGTACTCTACACTGCTGCGAACAAACCAACTGCTGCCGACGTAGGCGCTGAACCAACACTGGATGCCCTTCGTAAACGCAAAATTACCGTTGGTACTGGTACACCATCTGGCGGTTCAGATGGCGATATTTACTTGCAGTACAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5a2a4611e4b5103052e6a2acffa47024f7a994e6b4e1f7204ae1f74f52f120e5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3082
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50