Protein

Genbank accession
ACY75899.1 [GenBank]
Protein name
predicted protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSKRYLSGRVKRLPQDQLKDDRYKYLGLEQAEPNLADPITSPAVPSGQQYQLVAIPGFEGKRYWVPVGGGLIPGAISVYDEGTLVSAASSVTQLNFVGAAVTAQVDVQNPSGHPGIAATITVVPVTIGSNPPVSPIHGELWWEDDIGDLCIYYDDGDTSQWVTVVASGNGGGPTGPAGPPGPTGITGPSGPPGPSGPGGGPGPAGPQGDVGPSGGPGPTGPAGPPGPAGGPPGPQGPQGDAGPTGPTGPPGTGSPGPAGPPGPSGGPGPTGPAGPTGPDGPTGPTGPAGGPPGPPGPSGPPGPSGGDGPAGPSGSPGPPGPSGGPPGPSGGPGPAGPPGPDGPSGPPGPAGSAGAIPAGVVVMWSGAQNAIPSGWVLCDGNNSSPDLRDKFVIGAGSNYAVDNTGGSADAVVVDHSHSASTSVSGAGAHTHSFSASDSHTHSFSGSGSDTFSGSGSHTHSFSGSGSHGHSLSLSDSAHQHTSAIPAQNQVAGNSGSQTIWGSVTNSPTWGATANVSGSADSASVSISGTTGSGTASISGSVSISISGTTGSGTASISGTTGSGGSGVSGSTTISSTGVTGTNKNLPPYYALCYIMKS
Physico‐chemical
properties
protein length:597 AA
molecular weight: 56369,22530 Da
isoelectric point:4,80837
aromaticity:0,04523
hydropathy:-0,34070

Domains

Domains [InterPro]
IPR050149
171–447
IPR050149 SSF88874
SSF88874
355–485
SSF88874
cd22641
356–440
cd22641
ACY75899.1
1 597
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM2
[NCBI] 		268746 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >
Host Prochlorococcus marinus str. NATL1A
[NCBI] 		167555 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACY75899.1 [NCBI]
Genbank nucleotide accession
GU071092 [NCBI]
CDS location
range 20961 -> 22754
strand +
CDS
ATGTCTAAGAGATACTTAAGTGGGCGGGTCAAACGATTACCCCAAGATCAATTAAAAGATGATAGGTATAAGTATCTTGGTCTAGAACAGGCAGAACCAAACCTTGCCGATCCAATTACTAGTCCAGCAGTTCCTTCTGGTCAACAGTATCAGTTGGTTGCTATTCCTGGTTTTGAAGGTAAGAGATATTGGGTTCCTGTTGGTGGTGGATTAATTCCAGGTGCGATTAGTGTATATGATGAAGGAACTCTTGTTAGTGCTGCGAGTAGTGTAACTCAACTTAATTTTGTTGGTGCAGCAGTAACAGCACAAGTAGATGTTCAAAATCCTTCGGGACATCCAGGCATCGCTGCAACAATTACAGTTGTACCTGTTACTATTGGTTCTAATCCTCCAGTTAGTCCTATTCATGGAGAATTATGGTGGGAAGATGATATTGGAGACTTATGTATTTACTATGATGATGGTGATACTAGTCAGTGGGTTACTGTAGTTGCTAGTGGAAACGGTGGTGGTCCTACTGGTCCTGCTGGTCCTCCAGGTCCAACTGGAATAACTGGTCCTTCTGGTCCTCCAGGTCCTTCTGGTCCAGGTGGCGGTCCTGGTCCTGCTGGCCCTCAAGGTGATGTTGGTCCGAGTGGTGGTCCTGGTCCTACTGGACCTGCTGGTCCTCCTGGTCCTGCTGGTGGTCCTCCAGGTCCGCAAGGTCCGCAAGGTGATGCTGGTCCAACAGGTCCAACTGGTCCTCCTGGTACTGGATCTCCTGGTCCTGCAGGTCCTCCTGGTCCAAGTGGAGGTCCTGGTCCAACTGGTCCTGCTGGTCCTACGGGTCCAGACGGTCCTACAGGTCCAACTGGTCCTGCTGGTGGTCCTCCAGGTCCTCCTGGTCCAAGTGGTCCTCCAGGTCCGAGTGGTGGAGATGGTCCTGCTGGTCCAAGTGGTTCACCTGGTCCTCCAGGTCCTAGTGGTGGTCCTCCAGGTCCTAGTGGTGGTCCTGGTCCTGCTGGTCCTCCAGGTCCAGATGGTCCAAGTGGTCCTCCTGGTCCTGCTGGATCTGCTGGTGCGATACCTGCTGGTGTTGTTGTTATGTGGTCTGGTGCTCAGAATGCTATTCCTAGTGGATGGGTACTTTGCGATGGTAACAATAGCAGTCCAGATTTAAGAGATAAATTTGTTATTGGTGCTGGTAGTAACTACGCTGTAGATAATACAGGTGGTAGTGCTGATGCTGTAGTTGTAGATCACTCTCACTCTGCAAGTACTTCTGTTAGTGGTGCTGGTGCTCATACACACTCCTTCTCTGCTTCTGATTCTCACACTCACTCATTCTCAGGTTCGGGTTCAGATACATTCTCTGGTTCTGGTTCTCATACACACTCCTTCTCTGGTTCTGGTTCTCACGGACACTCTTTGAGTTTAAGTGACTCTGCTCACCAACACACATCTGCTATTCCAGCACAGAATCAAGTCGCTGGTAATTCAGGTTCTCAAACAATTTGGGGTAGTGTTACTAACTCTCCAACTTGGGGTGCAACTGCTAATGTTAGTGGTTCTGCTGATAGTGCAAGTGTTAGTATTTCAGGTACTACAGGATCGGGTACTGCAAGTATATCTGGTTCAGTATCAATCTCAATCTCAGGTACAACTGGTAGTGGAACTGCAAGTATATCTGGTACAACTGGATCTGGTGGATCAGGTGTAAGTGGTAGCACTACAATTAGTTCGACAGGTGTTACAGGAACGAATAAGAATCTTCCTCCTTATTATGCACTATGTTACATTATGAAGTCTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4dbdca54674d4207b788fed5884fd14a1a1a5aac06004f55591ed357db74431e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4914
Evidence 0,4914
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSM2 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank