Protein

View in Explore
Genbank accession
ACZ55517.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAVGEIQISALPQAALPIDLSDIFHLKQGIEDKRCTLEQLLAPHSSLRNNPHGVTKTQIGLDNVINALQLVAANNLSDITNVDEARANLQIMSSEEVNSLVQQHINDKSNPHNTTKAQVGLSNVQNWTTSNLYNEDADKYATARAVNNLYKAVQASYPVGTLHLSMNSANPATYLICGGTWELVSKGRALVGYSDNSRPVGSNFGSSSISLSSNNLPSHSHSIYLTGGGHTHGAAIAIDSFDYGTKGTSSFDYGTKNTNTTGNHSHSVSGSTNVTGNHQHSVGGRYGGDSIGGKQRVQVSGTNQISSVAGDHSHTISGSTNTVGNHYHSVAIGAHNHTVGIGAHTHKGTVTLQSSEHTHSGTTGATGAGQAFSVEQPSFVVYVWQRTA
Physico‐chemical
properties
protein length:388 AA
molecular weight: 40853,15730 Da
isoelectric point:6,65001
aromaticity:0,05412
hydropathy:-0,40309

Domains

Domains [InterPro]
DC_1039
STR
1–388
DC_1039
IPR051934
Unmapped
102–353
IPR051934
IPR053827
ATT
154–265
IPR053827
ACZ55517.1
1 388
Architecture
STR
ATT
STR
STR 1-153 | ATT 154-265 | STR 266-388
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ACZ55517.1
1 388
Domain Start End Length (AA) Confidence
N-terminal 1 210 210 0,6671
Central domain 211 377 168 0,0917
C-terminal 378 388 10 0,9973
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-210
Central
211-377
C-terminal
378-388

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SA1
[NCBI] 		694060 No lineage information
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACZ55517.1 [NCBI]
Genbank nucleotide accession
GU169904.1 [NCBI]
CDS location
range 83003 -> 84169
strand +
CDS
ATGGCAGTAGGTGAAATTCAAATTAGTGCCTTGCCTCAAGCAGCCTTACCAATTGACCTTAGTGATATCTTCCATCTTAAGCAGGGTATTGAGGATAAAAGATGTACTCTTGAGCAATTACTTGCTCCACACTCAAGCCTAAGAAATAACCCCCACGGTGTTACTAAAACACAAATTGGTTTAGATAACGTTATCAATGCTCTTCAGTTAGTTGCTGCAAATAATTTATCAGACATTACTAATGTTGATGAGGCAAGAGCAAATCTACAGATTATGTCTTCAGAAGAGGTTAATAGCCTTGTCCAACAGCATATTAATGATAAGAGTAATCCACACAATACAACTAAAGCACAGGTTGGTTTAAGTAATGTTCAGAACTGGACAACATCCAACCTTTATAATGAAGATGCAGATAAGTACGCTACAGCAAGAGCAGTAAATAACTTGTACAAGGCTGTTCAGGCTTCTTACCCTGTCGGTACATTACATCTCTCGATGAACTCTGCTAACCCAGCTACCTACCTAATTTGTGGAGGTACTTGGGAGTTAGTATCAAAAGGGCGAGCATTAGTAGGTTACAGTGATAATTCAAGACCAGTTGGTAGTAACTTTGGTTCTAGTAGCATTAGTTTATCTAGCAACAATTTACCATCACACAGTCATTCTATCTATCTAACTGGTGGTGGGCATACACATGGTGCTGCCATTGCTATTGACAGTTTTGATTATGGCACTAAGGGAACAAGTAGTTTCGACTATGGAACAAAAAACACTAATACTACAGGGAATCACTCACACTCAGTCAGTGGTTCTACCAATGTCACTGGTAACCACCAGCATAGTGTAGGTGGACGTTATGGTGGAGACTCTATCGGTGGTAAACAGCGTGTTCAGGTATCAGGAACAAACCAGATTTCAAGTGTTGCTGGTGACCACTCCCACACTATTAGTGGCTCAACTAATACAGTTGGCAACCACTACCATAGTGTTGCAATTGGTGCTCACAATCATACAGTAGGTATCGGTGCTCACACACATAAAGGCACAGTAACCTTGCAGTCATCTGAGCATACTCACTCAGGTACTACTGGTGCTACTGGTGCTGGTCAAGCATTTAGTGTTGAACAACCATCCTTTGTAGTTTATGTGTGGCAAAGAACCGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8ffcc6a67e0f60dad2227f370c2f469db0952d5490454732793f1b2e6b55e526
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7102
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Staphylococcal phage SA1 Lee,Y., Park,J. and Chang,H. 1986-08 — GenBank