Protein

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Genbank accession
YP_529890.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSEYNKTILTNEGIDLARRANKGTATFSLTRGVSSTDNLSGKTVEELQNLTTLPSIQQSVTLSDVVNTTDNSDTVLGIRMTFDNQNLKIGYNVHTVGIYAKEPDKNEILYGIATAKTPEYIPDFSEQTLFKFDFLMYLVIGRTDKVTVEVNPDDVYRKKDTYNKTEIDAKVSDAVSKLNDKDAEILKNLNDYKQENKTYHQNLEQQLDTKADKSAVNQQLETKADKSTTYTKDEVNNIISPKADKSYVDGELSKKADKATTYTKDEVNNKIAGQVKSVNGHRADSNGEVTLPKLKATTLISYDVANKSGTLDENAGFDSNGNFSRRPVDQLVIGQLADAINAKLPIEAGAADDDLCHLTSSKISFWNGNGENVKNLPPMNKKECYFAIRLVGPGGWGSVTVIDQDGTYWLNNKNGDIWTGWKRIANIDEVNSRLPLGGGKMAKGSTILWQGTNAGPNIQEGNIGGLQWNGATDYVKIFGDNNSSDNLDLAIQLGDDNSNRISIRNALGTETAAILADGHYTGTVNWDCVNGRPDINNANPVVTVINSFDVANVKEGPHQTCPVKQPWLVDQMALHPFAEAINALNTNLSTLRTELTNLKRRVDYNSPQGSFSNTTVNINDLRSTGIYRLANCYIQNGPYQTNNVHWIYVKVTVFDANTVYQTLYEGDNMYGRKSSSTSAWGQWHEYLNRPI
Physico‐chemical
properties
protein length:691 AA
molecular weight: 76404,95040 Da
isoelectric point:5,36363
aromaticity:0,07815
hydropathy:-0,58813

Domains

Domains [InterPro]
DC_2008
STR
1–373
DC_2008 Coil
Coil
Unmapped
175–209
Coil
YP_529890.1
1 691
Architecture
STR
STR 1-373 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage KC5a
[NCBI] 		363555 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus gasseri
[NCBI] 		1596 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_529890.1 [NCBI]
Genbank nucleotide accession
NC_007924 [NCBI]
CDS location
range 32880 -> 34955
strand +
CDS
ATGTCAGAATATAATAAGACAATTTTAACCAATGAAGGTATCGACTTAGCCCGCAGAGCTAACAAGGGTACGGCAACATTCTCTTTGACGCGAGGTGTTTCATCAACTGATAACTTATCAGGGAAGACTGTTGAAGAGCTTCAAAACTTAACTACGTTGCCCAGTATTCAGCAATCAGTAACCTTGAGCGATGTGGTAAATACTACTGACAATTCAGATACTGTTTTGGGTATCAGAATGACTTTCGATAATCAGAACTTGAAAATAGGTTACAATGTTCATACTGTTGGTATCTACGCAAAAGAGCCTGATAAAAATGAAATTCTTTACGGTATAGCTACGGCTAAGACACCAGAATATATTCCAGATTTTAGCGAGCAAACTTTATTCAAGTTTGATTTCTTAATGTATCTAGTAATTGGTAGAACAGATAAGGTAACTGTAGAAGTTAATCCTGATGATGTTTACCGTAAGAAAGATACATATAATAAGACTGAAATTGATGCTAAAGTTTCAGATGCCGTATCTAAGCTAAATGACAAAGATGCTGAAATCCTTAAAAATTTAAATGATTATAAGCAAGAAAATAAGACTTATCATCAAAATCTTGAACAACAGCTCGACACAAAAGCCGATAAAAGTGCAGTAAATCAGCAACTCGAGACAAAGGCAGATAAATCAACTACCTACACCAAGGACGAAGTCAATAATATAATTTCGCCTAAAGCTGACAAGAGCTATGTCGATGGCGAGCTAAGTAAAAAAGCAGATAAAGCTACTACTTACACCAAAGATGAAGTTAACAACAAAATTGCTGGTCAAGTTAAGTCAGTAAATGGTCATAGAGCAGATAGTAATGGCGAAGTAACGTTGCCTAAACTTAAAGCTACAACTCTTATCAGCTATGATGTAGCGAATAAGAGTGGGACGTTGGACGAAAACGCTGGTTTCGATAGCAATGGTAACTTTTCACGTCGGCCAGTAGATCAACTAGTAATTGGTCAATTAGCTGATGCTATCAATGCAAAACTGCCTATCGAGGCTGGTGCAGCGGACGATGATTTGTGCCATTTAACAAGTAGCAAAATTAGCTTTTGGAATGGTAATGGCGAAAACGTTAAAAACTTGCCGCCAATGAATAAAAAAGAATGCTATTTTGCTATAAGGCTAGTTGGGCCTGGTGGTTGGGGTTCTGTTACGGTTATAGATCAAGATGGTACGTACTGGTTAAACAATAAGAATGGCGATATTTGGACTGGGTGGAAAAGAATAGCAAACATCGATGAAGTAAATAGTCGACTGCCGCTTGGTGGCGGCAAGATGGCTAAAGGAAGCACTATTTTATGGCAAGGAACTAATGCTGGACCTAATATTCAGGAAGGCAATATTGGCGGTCTTCAATGGAATGGTGCTACAGACTATGTAAAAATTTTTGGCGATAACAATTCCTCTGACAATCTAGATTTAGCCATTCAACTTGGAGACGATAATTCTAACCGTATTTCAATTAGAAACGCCCTAGGCACAGAAACAGCTGCTATTTTGGCGGACGGTCATTATACGGGCACAGTTAATTGGGATTGTGTTAATGGACGACCAGATATTAACAATGCCAATCCTGTTGTAACTGTAATTAATAGTTTTGATGTTGCTAATGTAAAAGAGGGGCCTCATCAGACTTGTCCTGTAAAACAGCCTTGGCTGGTGGATCAGATGGCATTACACCCATTTGCAGAGGCAATTAATGCGTTGAATACTAATTTAAGTACTTTAAGAACAGAATTAACGAATTTGAAACGGCGTGTTGACTATAACTCTCCGCAAGGTTCATTTAGCAACACAACCGTCAATATTAATGACTTGAGGAGTACTGGTATTTATCGTTTAGCAAATTGTTACATTCAAAATGGACCTTATCAAACTAATAATGTGCACTGGATTTATGTCAAGGTAACAGTATTTGATGCTAATACTGTTTATCAAACGCTCTATGAAGGCGATAATATGTACGGCAGAAAATCCTCAAGTACCTCAGCTTGGGGACAATGGCATGAATATTTGAATAGACCTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee5342d07c56107a8c9bbe797d11dce38b714f3ebe4885c1aa3513556370a361
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7032
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Lactobacillus gasseri KC5a prophage Pavlova,S. and Tao,L. 1998 — GenBank