Protein

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Genbank accession
QYC53140.1 [GenBank]
Protein name
putative pre-neck/exonuclease
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAFKKIPLTIDTMIRNPVPVEGINQEDNIELNIVVTENKTPKDLSSQTIKVYVRRIDGTLVEQTDQITPTNASKGEVTVKLKNSAFNKEGYALFQLDISDSSGRITSSYATFKIGKGLVSGEVIANTNEIEALKKVEEYIKKANLEFPKYEEKINEFNKKTEEYKNEIVGYQGQVKEFQNATDSLQTQFDEAVANITNGVESATNSEIVQARGGEVNLNRRLDKFDSQLEHNVEYINDITINIKDYDSFNNDSEYWDEAVKEALKDNNNVFFPEGTYKFKNYITLSSYKNIKGVNSNLGNGVKFIFENDGFLIPTGTRYVTIENVQIYGSNKGVGIRYGDTASSARGTFHFIRFENVQLYGFYEGISLSSNVDGSTNESILWNCFFKNMRVEHCEKGLYCNNNPYSHFGIVFDCVYFNACNQVLFIKSLQGEFRGCNFGITNINSFNIDSNSYISFNNCNFECDSFISGSGNLFNARAKNIDFNNIVFISRCSSDISFFGVFSTLEQLSFKNCKYSKHTEDLMTLFWSKSNCETARMGVVEFLGGTNSIPRPQWTGVYASRYKDKLRDRMISYDLANNTNKDHSLARMGEYAFNPLNSLPIIHNGTNLTDFLGNTLGNDTNVHRLTNNLYIETGRVNIPTGYGLITVNYKRKKKGIFITSPTGFINSTKKKYMISIEQSEAYFDKDNYSVIKAYEWDESNKTWSANITTSFTIDYIKVSN
Physico‐chemical
properties
protein length:720 AA
molecular weight: 81703,39300 Da
isoelectric point:5,75179
aromaticity:0,12222
hydropathy:-0,46833

Domains

Domains [InterPro]
DC_1215
STR
1–386
DC_1215
G3DSA:2.60.40.3350
ATT
4–120
G3DSA:2.60.40.3350 Coil IPR012334
IPR018913
ATT
26–141
IPR018913 IPR011050
QYC53140.1
1 720
Architecture
ATT
STR
ATT 1-141 | STR 142-579 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYC53140.1
1 720
Domain Start End Length (AA) Confidence
N-terminal 1 254 254 0,9924
Central domain 255 562 309 0,9802
C-terminal 563 720 157 0,9711
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-254
Central
255-562
C-terminal
563-720

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage CPQ4
[NCBI] 		2863150 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYC53140.1 [NCBI]
Genbank nucleotide accession
MZ401006 [NCBI]
CDS location
range 20607 -> 22769
strand -
CDS
ATGGCATTTAAAAAGATACCTTTAACTATTGATACTATGATAAGAAATCCAGTGCCAGTTGAAGGGATAAATCAAGAGGATAATATAGAATTAAATATAGTTGTAACTGAAAATAAGACACCTAAAGACCTATCCAGTCAGACTATAAAGGTTTATGTAAGGCGTATAGATGGGACTTTGGTAGAACAGACCGACCAAATAACTCCAACGAATGCTAGCAAAGGTGAAGTTACTGTTAAACTTAAAAATAGTGCATTTAATAAAGAAGGCTACGCATTATTTCAACTAGATATATCTGATTCTAGTGGAAGAATAACAAGTTCTTATGCTACTTTTAAGATAGGAAAAGGATTGGTTAGTGGTGAAGTTATTGCTAACACAAATGAAATTGAAGCTTTAAAAAAGGTTGAAGAATATATAAAAAAAGCTAACTTAGAATTTCCTAAATACGAAGAGAAAATAAATGAGTTTAACAAAAAAACAGAAGAATATAAAAACGAAATTGTTGGATATCAAGGGCAAGTCAAAGAATTTCAAAATGCTACAGATTCATTACAAACGCAATTTGATGAAGCGGTAGCTAATATTACTAATGGGGTTGAAAGCGCAACTAATAGTGAGATAGTTCAAGCTAGAGGGGGAGAAGTCAATTTAAATAGAAGATTAGACAAATTTGATTCACAATTGGAACATAATGTGGAATATATAAATGATATTACAATAAATATAAAAGACTATGATTCATTTAATAACGATAGTGAATATTGGGATGAAGCTGTAAAAGAAGCATTAAAGGATAATAATAATGTGTTTTTTCCAGAAGGTACATACAAATTTAAAAACTATATAACATTATCATCATATAAAAATATAAAAGGTGTTAACTCAAACCTAGGTAACGGGGTTAAATTTATATTTGAAAATGATGGATTTTTAATACCAACAGGCACAAGATATGTAACTATTGAGAATGTACAGATTTATGGTAGCAATAAAGGTGTTGGTATAAGATATGGTGATACAGCAAGTAGTGCTAGAGGTACATTCCATTTTATAAGATTTGAGAATGTACAATTATACGGGTTTTATGAAGGAATTTCATTAAGTTCTAATGTTGATGGCTCAACAAATGAAAGTATCTTATGGAATTGTTTCTTTAAAAATATGAGAGTTGAACATTGTGAAAAAGGTTTATATTGTAATAATAATCCATATTCGCATTTTGGGATTGTTTTTGATTGTGTATATTTTAATGCTTGTAATCAAGTTTTATTTATAAAGTCATTACAAGGTGAATTTAGAGGTTGTAACTTCGGTATAACAAATATAAACTCTTTTAATATAGATAGTAACTCTTATATATCTTTTAATAATTGTAATTTTGAATGTGATAGTTTTATAAGTGGTAGTGGAAATTTATTTAATGCTAGGGCTAAAAATATAGACTTCAATAATATTGTGTTTATTTCAAGATGTTCTTCTGATATTTCATTCTTCGGTGTATTTTCAACTTTAGAGCAATTATCTTTTAAAAATTGTAAGTATTCTAAACATACAGAAGATTTAATGACTTTATTCTGGAGCAAATCAAATTGTGAAACAGCTAGAATGGGTGTTGTTGAATTTTTAGGAGGAACAAACTCTATCCCTAGACCACAATGGACGGGTGTTTATGCATCTAGGTATAAAGACAAATTAAGGGATAGAATGATTTCTTACGATTTGGCAAATAATACCAATAAAGACCATTCGTTGGCACGTATGGGAGAATATGCTTTTAACCCTTTAAATTCGTTACCAATAATACACAATGGCACTAACTTAACTGACTTTTTAGGTAACACACTAGGTAATGATACTAATGTTCACAGATTAACAAATAATTTATACATAGAAACAGGTAGAGTGAATATCCCTACAGGTTATGGATTAATAACTGTTAATTATAAAAGAAAGAAAAAAGGTATTTTTATAACTTCTCCTACAGGTTTTATTAATTCTACTAAAAAAAAATATATGATTTCAATAGAACAAAGTGAAGCTTATTTTGATAAAGACAATTATAGTGTTATAAAGGCTTACGAATGGGATGAAAGCAATAAAACATGGTCTGCAAATATAACAACATCATTCACTATAGATTATATTAAAGTGTCAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c64682e028479260675a9196cae0c3c63ee4f5a6eae2a7a0820be5a94fb677b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6772
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50