Protein

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Genbank accession
AMM44636.1 [GenBank]
Protein name
tail tubular protein A
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAFITKLDIVNACLKTMGETKLNTLEDDHVYKDDAVDLIDRVTRDVSSLALWFNTEWVELKPQATSKYIMVPTDALKLDCNPSRFGHVVQRGRRLYDRKRNTYEFDHNVQAKLVRLLDFDDLPYEVQMFVRDDSVLRFQSDFDGDNTKYAKIKQQRDDSYINLKSEHIRQIKANPLFARASVDVLRQRYFNYSGHPWHSHYTFPG
Physico‐chemical
properties
protein length:205 AA
molecular weight: 24172,02960 Da
isoelectric point:7,05613
aromaticity:0,11707
hydropathy:-0,62293

Domains

Domains [InterPro]
IPR033767
TTP
7–170
IPR033767
IPR033767
TTP
7–175
IPR033767
AMM44636.1
1 205
Architecture
TTP
TTP 7-175 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage f20-Xaj
[NCBI] 		1784979 Uroviricota > Caudoviricetes > Autographivirales > Gujervirinae > Pradovirus
Host Xanthomonas arboricola pv. juglandis
[NCBI] 		195709 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas arboricola

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMM44636.1 [NCBI]
Genbank nucleotide accession
KU595432.1 [NCBI]
CDS location
range 25686 -> 26303
strand -
CDS
ATGGCATTCATCACCAAGCTCGACATCGTGAACGCCTGCTTGAAGACGATGGGCGAGACGAAGCTCAACACGCTGGAAGATGACCACGTATACAAGGACGACGCAGTTGACTTGATCGACCGCGTTACCCGCGACGTGTCATCGCTCGCGCTGTGGTTCAACACCGAATGGGTGGAGCTGAAGCCGCAGGCAACGAGCAAGTACATCATGGTCCCCACGGACGCGCTGAAGCTGGACTGCAACCCGAGCCGGTTCGGCCACGTGGTGCAGCGCGGACGCCGACTGTACGACCGCAAGCGCAACACCTACGAGTTCGATCACAACGTGCAGGCCAAGCTGGTCCGGCTGCTGGACTTCGACGATCTGCCTTACGAGGTGCAGATGTTCGTCCGCGACGACAGCGTTCTGCGCTTCCAGTCCGACTTCGACGGCGACAACACCAAGTACGCCAAGATTAAGCAGCAGCGCGACGACAGTTACATCAACCTGAAGTCCGAGCACATCCGCCAGATCAAGGCGAACCCGCTGTTCGCTCGTGCATCCGTGGACGTGCTGCGTCAGCGGTACTTCAACTACAGCGGACACCCGTGGCATAGCCACTACACTTTCCCCGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
53399fd2fae9a2aad445613782f9bd1f2c3c6e760b70909d14491cdaa3f9d953
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9201
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Lytic Bacteriophages of Xanthomonas arboricola pv. juglandis Retamales,J., Vasquez,I., Santos,L., Segovia,C., Ayala,M., Alvarado,R., Nunez,P. and Santander,J. 2016 27257210 GenBank