Protein

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Genbank accession
CEK40417.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MLNEDVVKKLKNVPNNTNTEIEKVNTNIETAKTELNTKIDQLIAGGSNVASTQTITIDDWVDDTENGFKATVTHGLLTQRIVVNIIDATTKENVVTNFKIIDDNSIEIRSETRSELNVYVINGNAETHFINATVDDNRVSEMTTYSSKKIEDRFVNLEEKVNGGLSNIATSVNELITYC
Physico‐chemical
properties
protein length:179 AA
molecular weight: 19910,90080 Da
isoelectric point:4,61921
aromaticity:0,04469
hydropathy:-0,39944

Domains

Domains [InterPro]
DC_0386
STR
3–177
DC_0386
Coil
Unmapped
21–41
Coil
CEK40417.1
1 179
Architecture
STR
STR 3-177 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCD211
[NCBI] 		1582152 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CEK40417.1 [NCBI]
Genbank nucleotide accession
LN681537.2 [NCBI]
CDS location
range 48992 -> 49531
strand +
CDS
TTGTTAAATGAAGATGTAGTAAAAAAATTAAAAAATGTACCTAATAACACTAATACAGAAATAGAAAAAGTTAATACAAATATAGAAACTGCTAAAACAGAGTTGAATACTAAAATTGACCAACTTATCGCAGGTGGTTCAAATGTGGCATCTACTCAAACAATAACAATTGATGATTGGGTGGATGATACAGAAAATGGATTTAAAGCAACTGTAACACATGGTTTGTTAACACAGAGAATAGTTGTAAATATTATAGATGCTACTACAAAAGAAAATGTAGTTACAAATTTTAAAATTATAGATGATAATTCTATAGAAATTAGAAGTGAAACAAGGTCAGAATTAAACGTTTATGTGATAAATGGAAATGCAGAAACTCATTTTATTAATGCAACTGTAGATGATAACAGAGTATCTGAAATGACTACTTATTCGTCTAAGAAAATCGAAGATAGATTTGTTAATCTAGAAGAAAAGGTAAATGGTGGTTTATCTAATATTGCAACTAGTGTAAATGAGTTAATAACTTATTGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b23e2611b928783ff373dab694ac2ca246f83a852d1b24382f11ceefd5341696
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8346
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
High prevalence and genetic diversity of large phiCD211-like prophages in Clostridium difficile Garneau,J.R., Sekulovic,O., Dupuy,B., Soutourina,O., Monot,M. and Fortier,L.C. 2018-02 — GenBank