Protein

Genbank accession
AGH07144.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MSTIRIDELRALSDNNFKINLEGNDNLIIAGNIEMDSGASFSVPVGTTAQRPSSPVGGMLRYNTELGELEFYNGSNWATFIGAADGAAGGTTEGTAVTSVQGLYDAGLQQDGFYWLNFDGTAREYFVPLESHPYYILLGNWGGGASRFFGTQASALSGRELNTQGDVTPEGNFANNGTYGYYRNAGGSDFRYATMDRRGISYRYVKCKFNLYNYYSNDGINGRNFLGISSGVGDGLTIMRDNSGDGDGQHIFTYVTAISNQDGNSCPSTAGRYPSHRRQGNNPGGFMGDRFTCFSREGNSYTSEYVRNFTPFAGDSSGGTKPNVYNGDAWYTIDLGQNYAHNMHCVIHSDQDSGNEDTYLKRGVVLVRPA
Physico‐chemical
properties
protein length:370 AA
molecular weight: 40258,35540 Da
isoelectric point:4,99617
aromaticity:0,12703
hydropathy:-0,54784

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIM2 R1_1999
[NCBI] 		869662 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH07144.1 [NCBI]
Genbank nucleotide accession
HQ317292 [NCBI]
CDS location
range 29693 -> 30805
strand +
CDS
ATGAGCACTATTAGAATAGACGAACTCAGAGCATTATCTGACAACAACTTCAAAATCAATCTTGAGGGTAATGATAACCTTATCATTGCTGGTAACATTGAGATGGATAGTGGCGCATCTTTCTCTGTTCCTGTAGGCACAACTGCACAGAGACCTAGTTCTCCTGTTGGTGGAATGTTGAGGTACAATACTGAACTTGGAGAACTAGAGTTTTATAATGGAAGTAACTGGGCAACTTTTATTGGTGCTGCCGATGGCGCAGCAGGAGGAACAACAGAGGGTACAGCAGTAACAAGTGTTCAGGGATTATATGATGCTGGTTTACAGCAAGATGGATTCTATTGGTTGAATTTTGATGGCACTGCAAGAGAATACTTTGTTCCATTAGAGTCACATCCATATTATATTTTGTTGGGTAACTGGGGCGGTGGTGCTTCTAGATTCTTTGGTACTCAAGCATCAGCACTTTCTGGTAGAGAACTTAACACTCAGGGAGATGTAACTCCTGAAGGTAACTTCGCCAACAATGGTACATATGGTTACTATCGAAATGCTGGCGGTAGTGATTTCAGATATGCAACGATGGATCGTAGAGGTATCTCTTATCGCTATGTTAAGTGTAAGTTTAACCTTTATAACTATTATTCAAATGATGGTATAAACGGTAGAAACTTCTTGGGTATTAGTAGCGGTGTTGGTGACGGTTTGACTATCATGAGAGATAACTCTGGTGATGGTGATGGTCAACATATTTTCACTTATGTCACTGCCATAAGTAATCAGGATGGCAACAGTTGCCCGAGTACAGCAGGGCGTTATCCCTCACATAGAAGACAGGGTAACAATCCTGGTGGATTTATGGGTGACCGATTTACTTGTTTCTCAAGAGAAGGTAATAGTTATACCAGTGAGTATGTAAGAAACTTTACTCCTTTTGCTGGAGATAGTTCTGGTGGAACTAAACCAAATGTATATAATGGTGACGCATGGTACACAATCGACCTGGGTCAAAACTACGCACATAATATGCATTGTGTGATTCATTCCGATCAAGATAGTGGAAACGAAGATACATACTTGAAGAGAGGAGTAGTCTTAGTACGTCCTGCATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
b10b1576564c7ff6b9defc83ff56e535e886b0f23957fc3db0b13af9760c2c08
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4794
Evidence 0,4794
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-RIM2 isolate R1_1999 Henn,M.R., Marston,M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank