Protein

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Genbank accession
WOZ53431.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTIIYDVTGHKGGGGKQHTPQETPDSLHSLAKIRILLALGEGEFESITSASELRQRVYLDGTPIQNADLSENFPGARVEFRPGTQHQDVIHGFSAVESEQSVGVKLENGTPWVRQINDTSLDAVRIRIGIPALYTSEDNGDLVGGRIDYKIVVYTDNADPREFTFAAVGKTMSLYERDHRIELPPNVNTGWRVEVHRITADSTSAKVVNDIQVQSITEIIDARLRYPLTALLFVEFDAKAFQNIPRVSIKCKGRKVLIPNNYDPINHTYSGDWDGTFKRAWTDNPAWHWYDICITERFGLGRRIKPQMLNRYALYQIAQRCDQLVSDGNGGREIRFKNDMYIQSQTDAWTVLKDLAAIFAGMTWWGNQMLNIVSDQPVAAVSHTITNASVIDGRFDYASGSQKTRYSTFAVAYGNPKNHYDDAIATGQRVELVRRHKINRLDITAIGCTRESEAQRRGHWALISNQLDQQVSFKVGMEGLFFIPGSVVAIADTNISGGFETRGGRLLSDPGTRTVLNTDGEITFRPGDKFLVRTDSGNVETREIVSVNGNKVTLKTALDADPIPDQPFCVDGDDIQLQKFRITDLEYDDSTSTFSVRGIEYNDSKYDAVDNGARLDPGIFTQVPDGVMKGPESVTITPSQISSQGQLITNVDIVFPPVKDAVVYEIQWRRTSLQNLEIQWGNDWVNIPRTASNGAHIPNVFSGNYQARVRAIGMGEISSPWVSSPITPVEGRLGGLNAPIITNAISGLHQILWKWNHNNAATDISYTELEVRKTGETEWKFLTNVPYPGAEYAQTSLEFGIYQQLRARVADKIGNLSDWSAPFEGQVSDKVDEYMKGLDDEFLTSEDGKHFQEAIDTIPQGIYESMLTDAQQLFNARSEYKGIYAEITVAYNVAADAHKAVAQLETLIGTRLDDAEAAIHTLQTAQSTHEQAFAQYQQTVAAKFGEQEAAIQQVQTATADVAGALAEYKTQVAAQFGQQSAAIEQKMTSTFNHAGGNATYSLKAGVTYNGTYYDAGMQLSVVAEGGAVKSRIAFKADQFYIMHPSNGSLSSAFIVDGGAVYIDTARIKDATINFAQITDTLQSNNYDGNTRGWRLGKDGTFINLGTGSGGGTKQTNTNYSVKDENGVLRVQIGELTGRW
Physico‐chemical
properties
protein length:1139 AA
molecular weight: 125751,71460 Da
isoelectric point:5,25519
aromaticity:0,09043
hydropathy:-0,38077

Domains

Domains [InterPro]
DC_0014
STR
1–1139
DC_0014
IPR053171
Unmapped
7–857
IPR053171 IPR015406
IPR055385
ATT
96–222
IPR055385 IPR032876
WOZ53431.1
1 1139
Architecture
STR
ATT
STR
ATT
STR
STR 1-95 | ATT 96-222 | STR 223-343 | ATT 344-495 | STR 496-1139
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WOZ53431.1
1 1139
Domain Start End Length (AA) Confidence
N-terminal 1 515 515 0,9186
Central domain 516 1080 566 0,0295
C-terminal 1081 1139 58 0,8298
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-515
Central
516-1080
C-terminal
1081-1139

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage 1b
[NCBI] 		3075953 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WOZ53431.1 [NCBI]
Genbank nucleotide accession
OR420686.2 [NCBI]
CDS location
range 26919 -> 30338
strand +
CDS
ATGACGATTATCTACGACGTCACAGGGCATAAAGGCGGCGGCGGCAAACAGCACACCCCACAGGAGACGCCCGATAGCCTGCATTCGCTGGCTAAAATCCGCATCTTGCTCGCACTGGGTGAAGGGGAATTCGAAAGTATTACCAGCGCCAGCGAATTGCGTCAGCGTGTATATCTGGACGGAACACCGATCCAGAACGCGGATCTGTCCGAAAACTTCCCCGGCGCGCGCGTGGAGTTCCGCCCAGGTACACAGCACCAGGATGTGATCCACGGATTTTCGGCGGTGGAAAGTGAGCAATCTGTCGGCGTAAAACTGGAAAACGGCACGCCGTGGGTGCGCCAGATTAACGATACCAGTCTGGACGCCGTGCGCATTCGAATCGGTATTCCGGCCCTGTACACTAGCGAAGATAATGGCGACCTTGTGGGCGGGCGCATCGACTATAAGATCGTTGTGTATACAGATAACGCAGACCCGCGTGAGTTTACATTCGCTGCCGTTGGTAAAACTATGTCGCTGTACGAGCGCGATCACCGCATCGAACTACCGCCGAACGTAAATACCGGCTGGCGCGTAGAGGTGCACCGCATAACGGCGGACTCCACATCGGCAAAAGTGGTTAACGATATCCAGGTGCAATCTATCACTGAGATTATCGACGCCCGTCTTCGCTACCCGCTAACCGCGCTGTTGTTTGTGGAGTTCGACGCCAAAGCGTTCCAGAACATCCCGCGCGTGTCCATCAAGTGCAAAGGCCGCAAAGTTCTAATACCGAACAACTACGACCCGATTAATCATACCTATTCCGGGGACTGGGACGGCACGTTTAAACGCGCATGGACGGATAACCCTGCGTGGCACTGGTACGATATTTGTATTACTGAGCGCTTCGGCCTCGGTCGGCGTATCAAACCGCAAATGCTAAACCGGTACGCGCTCTACCAGATTGCGCAGCGCTGCGACCAGTTGGTCAGCGACGGCAACGGCGGACGGGAAATACGATTTAAGAATGATATGTACATCCAGTCGCAGACAGACGCCTGGACAGTGCTTAAGGATTTGGCTGCCATCTTCGCCGGAATGACCTGGTGGGGCAACCAGATGTTGAATATCGTCAGTGACCAACCGGTCGCAGCAGTGTCGCACACTATCACCAACGCCTCGGTTATTGATGGTCGATTCGACTACGCATCTGGCAGCCAGAAAACGCGCTATTCCACATTCGCGGTAGCATACGGCAATCCGAAAAACCACTATGATGATGCCATCGCAACGGGGCAACGTGTAGAACTGGTACGCCGCCATAAGATTAACCGTCTTGATATTACGGCGATCGGCTGTACGCGTGAATCTGAAGCGCAACGACGCGGGCACTGGGCGCTAATCTCAAACCAGCTTGACCAGCAAGTTAGTTTTAAGGTGGGTATGGAGGGGTTATTCTTTATCCCCGGTAGCGTAGTCGCGATCGCAGATACTAATATTTCTGGCGGATTCGAGACTCGTGGCGGGCGACTGTTGTCGGACCCCGGAACGCGTACCGTGCTGAACACGGACGGCGAAATCACGTTCCGCCCCGGTGATAAATTCCTGGTACGCACCGATAGCGGTAATGTGGAGACTCGCGAGATCGTCAGCGTCAACGGCAACAAGGTTACACTAAAAACCGCACTGGACGCCGACCCGATCCCTGACCAGCCGTTTTGCGTTGATGGCGATGATATCCAGTTGCAGAAATTCCGCATCACCGACCTTGAATATGACGACTCTACCAGCACCTTTTCAGTGCGCGGGATCGAGTACAACGACAGCAAATATGATGCCGTTGATAATGGCGCTCGTCTTGACCCGGGCATCTTTACGCAAGTGCCTGACGGCGTAATGAAGGGGCCGGAGTCCGTGACCATCACCCCTTCGCAGATTTCATCGCAAGGCCAGCTAATCACCAACGTGGATATTGTTTTCCCACCGGTGAAGGATGCCGTTGTCTATGAAATCCAGTGGCGACGCACCAGCTTGCAGAATCTGGAAATCCAGTGGGGAAACGACTGGGTGAACATCCCACGCACGGCATCGAACGGTGCGCACATCCCTAACGTGTTCTCCGGTAACTATCAGGCACGCGTCCGCGCAATCGGTATGGGCGAAATCTCGTCCCCGTGGGTGTCGTCCCCCATCACGCCGGTGGAAGGTCGCCTCGGTGGTCTTAACGCGCCTATCATCACCAACGCGATTTCTGGCCTCCACCAGATCCTATGGAAGTGGAATCACAACAACGCCGCGACGGATATTTCATACACCGAGCTCGAAGTGCGCAAGACCGGTGAAACGGAATGGAAATTTCTTACCAACGTCCCATATCCGGGGGCGGAGTATGCGCAAACGTCGCTGGAGTTCGGGATCTACCAGCAGTTGCGCGCCCGCGTAGCAGATAAAATCGGCAACCTGTCAGACTGGTCGGCCCCGTTTGAAGGCCAGGTGAGTGACAAAGTTGACGAGTACATGAAGGGGCTTGATGACGAGTTCTTGACTTCCGAGGATGGAAAACACTTCCAGGAAGCAATAGACACCATTCCGCAAGGCATTTATGAATCAATGCTTACGGATGCTCAGCAGCTATTCAATGCCCGATCCGAGTATAAAGGGATTTATGCGGAAATCACGGTGGCGTATAACGTGGCAGCGGATGCCCACAAGGCGGTCGCGCAACTTGAGACGTTGATCGGCACGCGCCTTGACGATGCGGAAGCGGCGATCCACACGTTGCAGACCGCGCAAAGCACGCATGAACAAGCCTTCGCCCAGTACCAACAAACTGTTGCCGCTAAGTTCGGGGAACAGGAAGCTGCAATCCAGCAGGTACAAACGGCAACGGCAGACGTAGCGGGCGCGCTGGCGGAGTACAAGACCCAGGTGGCGGCACAGTTCGGTCAGCAGTCTGCCGCTATTGAGCAGAAGATGACGTCAACGTTTAACCATGCCGGTGGCAACGCCACATACAGCCTTAAGGCGGGCGTGACATATAACGGGACTTACTATGACGCCGGTATGCAGCTTTCCGTAGTGGCGGAAGGCGGCGCGGTTAAATCCCGCATCGCATTCAAAGCAGACCAATTCTACATAATGCACCCATCTAACGGGTCGCTTTCGTCCGCGTTTATCGTAGACGGCGGCGCGGTGTATATTGACACGGCACGCATCAAAGACGCGACTATCAACTTCGCGCAGATCACGGACACGTTGCAATCTAATAACTATGACGGCAACACGCGTGGTTGGCGCTTAGGGAAAGACGGAACGTTTATCAACCTGGGGACTGGAAGCGGTGGTGGTACAAAGCAGACCAACACCAACTACAGCGTTAAAGACGAGAACGGTGTTTTACGCGTGCAAATTGGCGAGCTTACTGGTCGCTGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4b0a0f77053407a144af16b1ef00dba81135c4137202b14e6f3ffc419a6717c9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7857
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50