Protein

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Genbank accession
YP_010683281.1 [GenBank]
Protein name
distal tail protein Dit
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVFQFNGYDLNDYFKLIKVSHEIGNERDITTDSAPKIGVNVQQVSFGAKKIKLTVSLATRDLNDNAFVDPNEPAQIDSGMFHHVREQAAKVLHSDKPVELKLPDEPDRYYLAIVKGDVTLKGISDWYDQTEIEFLVPDGVAHSTTYRSFETPKIENNKMVFDLVNDGSVNANPIITVKHNSENGYIGLVNSTGICELGDRLEANTEDYRHSEVLFDYASSNGEHRIPNGLSQGLKNIGISNDVNDTKPNGTLYIDNAWGRPHIALQSGQVASVTFDIPRDSSGEKGALYEYFWWRQIFWLGSANQMGYLKICVTDASGTFLYGVETFKRYNGLGCEYNFLAADGKGGFRIVDRKNFLGTHIEQQNPFNEPRGWSDIMRFDDVVQFYWWGSYPRYSIPEIKGKKSDKIHVIFGKVGNAPLVTHMYLDDFIYRKDYILGVRDIPNRYRAGGEVVIDSETDTVTVDNIPKIVDVVQGSDFLTIPPGKSQLEVYCSSWVTTKPSVSVKFEERYI
Physico‐chemical
properties
protein length:511 AA
molecular weight: 57666,98400 Da
isoelectric point:5,27315
aromaticity:0,11546
hydropathy:-0,40294

Domains

Domains [InterPro]
DC_0077
STR
1–511
DC_0077
G3DSA:2.40.30.200
ATT
2–143
G3DSA:2.40.30.200 IPR054738
IPR008841
STR
14–137
IPR008841
IPR006520
Unmapped
84–143
IPR006520
YP_010683281.1
1 511
Architecture
ATT
STR
ATT 1-143 | STR 144-511
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010683281.1
1 511
Domain Start End Length (AA) Confidence
N-terminal 1 204 204 0,9286
Central domain 205 403 200 0,1807
C-terminal 404 511 107 0,5558
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-204
Central
205-403
C-terminal
404-511

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage P9853
[NCBI] 		1971445 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010683281.1 [NCBI]
Genbank nucleotide accession
NC_071080 [NCBI]
CDS location
range 14135 -> 15670
strand +
CDS
ATGGCCGTGTTTCAATTTAACGGATATGATTTGAATGATTACTTCAAATTAATCAAAGTGTCGCACGAAATTGGGAATGAACGCGATATCACTACAGACTCAGCCCCTAAAATTGGGGTTAATGTTCAACAAGTTTCGTTTGGTGCTAAAAAAATAAAATTAACTGTCAGCTTAGCAACTAGAGACCTTAACGATAATGCTTTCGTAGACCCAAACGAGCCCGCTCAAATTGATAGCGGTATGTTTCATCACGTAAGAGAACAAGCGGCTAAAGTGCTACACTCTGATAAACCGGTAGAATTGAAATTACCTGATGAGCCAGATAGGTACTATTTAGCGATAGTAAAGGGTGATGTTACTTTGAAAGGCATCTCTGACTGGTATGACCAGACTGAAATAGAATTTTTAGTACCTGACGGAGTCGCACATTCGACTACCTATCGCAGTTTTGAAACCCCTAAAATAGAGAACAACAAGATGGTATTTGACCTTGTTAACGATGGATCAGTTAATGCTAACCCAATAATTACAGTGAAGCACAATAGTGAGAATGGCTATATTGGATTAGTTAATAGCACAGGTATCTGCGAGCTTGGGGACAGGTTAGAAGCAAATACAGAAGATTATAGACATTCAGAGGTACTTTTTGATTACGCTTCGTCAAACGGGGAGCACAGAATCCCTAACGGTTTATCTCAAGGATTGAAAAATATTGGCATCTCAAACGATGTCAACGACACCAAGCCAAACGGCACTCTTTACATTGATAATGCTTGGGGACGACCTCACATTGCTTTGCAGAGCGGTCAAGTAGCATCTGTTACTTTTGACATCCCAAGAGATTCAAGCGGTGAAAAAGGTGCGCTATATGAATACTTTTGGTGGAGGCAAATTTTCTGGCTTGGTTCTGCGAATCAGATGGGCTATCTGAAAATTTGCGTCACAGATGCAAGCGGCACTTTCTTGTATGGTGTCGAAACTTTTAAACGTTACAATGGTTTAGGCTGTGAATATAATTTTCTAGCTGCTGACGGCAAGGGAGGTTTCCGTATTGTCGACAGGAAGAATTTTTTAGGAACACACATCGAGCAGCAAAACCCATTTAATGAACCAAGGGGTTGGTCAGATATAATGAGGTTTGATGATGTCGTCCAATTTTATTGGTGGGGGTCATACCCAAGATATTCTATCCCCGAAATCAAGGGGAAAAAATCAGATAAAATTCATGTCATTTTTGGTAAGGTCGGCAACGCACCACTTGTTACACACATGTATTTAGATGATTTCATTTACCGAAAAGACTACATCTTAGGTGTCAGGGATATCCCTAATAGATACCGCGCTGGTGGGGAAGTGGTAATAGATAGTGAAACTGATACCGTCACTGTAGATAATATTCCAAAGATTGTCGATGTTGTGCAAGGCTCTGACTTCCTCACAATCCCACCAGGAAAATCACAGCTAGAAGTCTACTGCTCAAGCTGGGTAACAACTAAACCATCCGTATCTGTTAAATTTGAGGAGAGATATATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ba3ac79ec2bb0f85b9c612764ba37e3be32454550c46e62c258810d08e219573
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8620
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50