Protein

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Genbank accession
QIN97205.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MALTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYVIDNRPGEVLYTNTAPIDENSNLDLTSPNNVLYKFNSVEGGVIVPRGCSLVGTDLRRTKIIPKYVPYPTLYSDKGILNEAQIPPRSAIFKVTGGTYFWQFSFFDGAEEGVYFKPDSVETLPPKFSHHRLTCFEFADGLNNLSALINNGTVPQADYSAVPNIYERTDLDIYYQKISKAFATIPDTSGDPTTDQIQARVEENRIVGPISDEYRVLQITRNGQTATAVTVDEFDNPRDHGFSVGVNINISGVTGSTGPQSELDATVFNGSFTVTSTPTGSTFTYQLTSVPSGNAVGSNITVKTEIDTVDSASPYAFNLSLRSVWGMNGMHADGSKATGFKSMVVAQFTGLSLQKDDRAFVRYNASTGSYDVATAGDGAHLDGFAEYRKGWAHRHIVASNDAFIQAVSVFAVGYGTHFTCESGADMSITNSNSNFGSTALRAAGFKAKAFSKDKAGTITHVIPPKALNVISTTATGSSGSQTIILANDGSINGIIEGMTVTGDNIGTSATVLSFNVNTRAVVLSVANTAAVDNNVIFGEETSVNWVNIDIQRTKVINSALAGQGGTPGTRLYLYGYTTEASPPTTKVQGFAVGARQDGTGVDAVPDKLNVLLVANGATAASVHSAFISPYGPSVSSLSAGETGSPIQYDSNTYTISGQAGSVGGWYLSVDSNDNDIYTTLSTNAQYNNVNFSPTTFLKRIPDPRDLADRTYRVRYVIDKDKTNPLPRDPISGYVLQPLNSDTTSYKLNKTFYIYDIEVVQEFERGVSDGIYYLTLLCASIAPSTSNFNDRKFSQNVNEVYPTFDRDNPVADPDASVSVADNETIGLVYATDGATPTPNKDPKLSVTKEAIEFLLTDTGWTQPGTTPNYDSVNQRLSNVELTARAGNEETRKIKIRENNDGTVAPINVEFRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLSADQVKFSQSIKEEAGVAFYSGLNSNGDLFIGNQVINPVTGQITNEDIAQLNVVGEENTTIETFSELVLTDKLTVIGGASNQLESIFAGPVTFQGLTTFTNNIQARKISYYNQDGTVIKQTLLAPEDASGNPSFTNITGYTTPADGDLVYNINWTPGKSLGWIYYNGVWKEFGLTDTGEINIDTFNNTQHIGIGTAATSGYRISIDGSVYIDGDVVGTGRGVVGSDKYFTKTYTGNGSQLTFSISTYSGGIQHTDDSVLVFLNGVAQIAGTNYTVDANGANVVFSAGDAPQSTDTVHIVELPI
Physico‐chemical
properties
protein length:1321 AA
molecular weight: 142339,62590 Da
isoelectric point:4,76290
aromaticity:0,09765
hydropathy:-0,24239

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIN97205.1
1 1321
Domain Start End Length (AA) Confidence
N-terminal 1 86 86 0,9720
Central domain 87 310 225 0,9587
C-terminal 311 1321 1010 0,0988
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-86
Central
87-310
C-terminal
311-1321

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H25
[NCBI] 		2718941 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN97205.1 [NCBI]
Genbank nucleotide accession
MT162468.2 [NCBI]
CDS location
range 23677 -> 27642
strand +
CDS
ATGGCACTAACTCGTCTTAAGAATATTATTACGTCCAGAACTGGACGTATCATTTATGTAAACCCAGACGACTTCGATGCCTCTGATGCGATTGACAACAGGGGCAACTCTGCATTGAGACCATTCAAGTCCATTCAGAGAGCATTCCTTGAGGTTGCTAGATTTTCGTATCGAGTAGGTTTGTCGAACGACGAATTCGACGCCTTCTCGATTATGCTGTATCCAGCAGAATATGTTATTGACAATCGTCCTGGAGAAGTTCTGTATACCAATACAGCGCCCATTGATGAAAATTCTAACTTAGACCTCACATCTCCCAATAACGTATTATATAAGTTTAACTCTGTTGAAGGTGGCGTTATTGTTCCCAGAGGTTGTTCTCTGGTTGGTACTGACCTTCGTCGTACTAAAATTATTCCCAAGTATGTTCCATATCCAACACTTTACAGCGATAAGGGTATTCTAAACGAAGCACAAATTCCTCCCCGTAGTGCTATTTTTAAGGTAACTGGTGGTACATACTTCTGGCAGTTCTCCTTCTTCGATGGTGCTGAGGAAGGTGTATACTTCAAACCAGATAGTGTAGAGACTTTACCTCCCAAATTCTCTCACCATAGACTTACCTGCTTTGAATTTGCTGATGGTTTGAATAACCTGTCGGCACTTATTAATAATGGTACAGTTCCTCAGGCAGATTATTCTGCTGTTCCAAATATCTACGAGAGAACTGACTTAGATATCTATTATCAGAAGATTTCCAAGGCATTTGCTACAATTCCTGATACTTCTGGTGACCCAACAACCGACCAAATTCAGGCAAGGGTTGAAGAAAATCGTATCGTTGGTCCTATTTCGGATGAATACAGAGTCCTTCAAATCACAAGAAATGGTCAGACAGCAACGGCAGTCACTGTTGATGAGTTTGATAACCCCAGAGACCATGGATTTTCCGTTGGCGTTAACATTAACATTAGTGGTGTTACTGGATCAACTGGACCGCAATCCGAACTTGATGCAACAGTTTTTAACGGATCTTTCACCGTCACTTCGACGCCGACTGGTTCAACATTTACATACCAGTTAACATCTGTTCCATCAGGTAATGCTGTTGGCAGTAACATTACTGTTAAGACTGAGATTGATACTGTTGACTCTGCATCTCCATATGCGTTTAACCTGTCCCTGAGAAGTGTCTGGGGCATGAATGGTATGCACGCAGATGGCAGTAAGGCAACTGGTTTCAAATCGATGGTTGTTGCACAGTTTACTGGTCTGTCTCTGCAGAAAGATGATAGAGCGTTTGTAAGATATAATGCTTCTACTGGTAGTTATGATGTAGCAACTGCTGGTGATGGTGCTCACTTAGACGGTTTTGCTGAGTATCGTAAGGGTTGGGCACACAGACACATTGTTGCATCCAACGACGCATTTATTCAGGCAGTTTCGGTCTTCGCGGTTGGATATGGCACACACTTCACTTGTGAGAGTGGTGCTGACATGTCGATTACTAACTCTAACTCTAACTTTGGTAGCACTGCTCTTCGCGCTGCTGGATTCAAAGCAAAAGCATTCTCCAAAGATAAAGCGGGTACAATCACACACGTTATTCCACCCAAAGCATTAAACGTTATTTCTACAACTGCAACTGGTTCGTCTGGTTCTCAGACTATCATACTTGCTAACGATGGTTCTATCAACGGAATCATCGAAGGTATGACTGTTACTGGCGATAATATTGGAACCAGTGCAACTGTTTTATCTTTCAATGTTAACACCAGAGCAGTTGTTCTTTCTGTTGCAAATACCGCAGCAGTCGATAACAACGTTATCTTCGGTGAAGAAACTTCTGTCAACTGGGTGAACATTGACATTCAACGCACAAAAGTTATTAACTCGGCACTTGCTGGTCAAGGTGGAACTCCTGGTACAAGACTCTACCTTTATGGATACACTACAGAAGCATCTCCCCCAACAACAAAAGTACAGGGTTTTGCTGTAGGTGCTCGCCAAGATGGTACTGGCGTTGATGCTGTACCTGATAAGTTAAATGTATTGTTAGTTGCTAATGGCGCAACTGCTGCATCTGTACACTCGGCATTTATTTCGCCATATGGTCCTAGCGTTTCCAGTCTTTCTGCTGGGGAAACAGGTTCTCCAATTCAATATGATAGCAATACATACACTATTAGCGGTCAAGCAGGTTCTGTTGGTGGTTGGTATCTGAGTGTAGACTCTAATGATAACGACATCTATACCACTTTATCTACTAACGCACAGTACAATAACGTAAACTTCAGTCCTACAACATTCCTTAAGAGGATTCCTGACCCCAGAGACTTGGCGGACAGAACTTATCGTGTACGTTATGTAATCGATAAGGATAAGACTAATCCTCTGCCTAGAGATCCTATCAGCGGTTATGTATTACAACCTCTGAATAGTGACACTACAAGTTACAAGTTGAACAAAACCTTCTATATCTACGATATTGAGGTTGTACAAGAGTTTGAGAGAGGTGTTTCTGATGGAATCTACTATCTTACCCTGCTTTGTGCATCTATTGCACCTTCGACTTCTAATTTCAACGACAGAAAGTTCAGTCAAAACGTCAACGAAGTCTATCCTACGTTTGACAGAGACAACCCTGTTGCTGACCCTGATGCTTCGGTATCCGTCGCTGACAACGAAACTATCGGTTTAGTTTATGCAACCGATGGTGCTACACCTACACCCAATAAAGACCCTAAACTTTCTGTTACTAAGGAAGCAATTGAGTTTCTGTTGACTGATACTGGTTGGACACAACCAGGTACAACACCTAACTATGATTCTGTTAACCAAAGACTGTCTAATGTTGAACTTACTGCAAGAGCAGGTAATGAAGAAACCAGAAAGATTAAAATCCGCGAAAATAATGATGGAACAGTCGCACCAATCAATGTTGAATTTAGGAGACACTCCATCCTCAGGTCTGGTAACCATACCTTTGAGTATCTGGGATTCGGTCCTGGTAACTATTCAACGGCATTCCCTCAGACGCAAGTAGAGACCTTATCTGCTGACCAAGTTAAGTTCTCTCAGTCGATTAAAGAGGAAGCAGGTGTTGCCTTCTATTCGGGTCTTAACTCTAACGGTGACCTGTTTATTGGTAACCAGGTTATCAACCCTGTTACAGGTCAGATTACAAACGAAGATATCGCACAACTGAATGTTGTCGGTGAAGAGAACACAACGATTGAGACATTCTCTGAGTTGGTTCTTACTGACAAACTCACGGTTATCGGTGGTGCATCTAACCAGTTAGAATCTATCTTCGCTGGTCCTGTTACCTTCCAAGGACTTACTACCTTCACAAATAACATCCAAGCAAGAAAGATTTCTTACTATAACCAGGATGGTACGGTAATTAAGCAAACCTTACTGGCACCCGAAGATGCAAGTGGCAATCCCAGCTTTACAAACATTACGGGGTATACTACACCCGCTGACGGTGATCTTGTTTATAACATTAATTGGACACCTGGCAAGTCTCTTGGGTGGATTTATTACAATGGAGTGTGGAAAGAGTTTGGTCTCACAGATACTGGTGAGATTAATATTGATACCTTCAATAATACTCAACATATTGGTATTGGCACTGCTGCTACGTCTGGATACCGTATTTCGATTGATGGCAGTGTATACATTGATGGCGACGTTGTAGGTACTGGTCGTGGCGTTGTTGGTTCTGATAAGTATTTTACCAAGACATATACTGGAAATGGTAGTCAATTGACATTCTCCATCTCCACTTATAGTGGCGGCATTCAGCACACTGATGACTCTGTTCTGGTATTCTTGAATGGTGTTGCTCAGATTGCTGGCACAAACTATACCGTTGATGCTAACGGAGCAAACGTTGTGTTCAGTGCTGGTGATGCTCCACAGTCCACTGATACTGTTCATATTGTAGAACTGCCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
47f8feaffa998a91e4ff08ce28bdcfa4b46c41b1353a14ce27ee3991dce09249
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3890
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H25 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank