Protein

View in Explore
Genbank accession
QXG07660.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MNQKRVTGSKGGESKPYTPIEMADNLISINKIKILLAVSDGEVDSEFRRGMVMFNDVSLDSYPDVVAEFRPGTQTQGYIKGFADTSSEITVNRALTTTNPFVYSITNKVISATRVKIMAPRLVQAKSNGDRVGVRVNYKIEIAVDGAPYQTVIDDVIQGKNTTTGYDRTRRVNLPAFNNQVLVRVSRITADSTDSNLVDAIQVQSYAEVVDAKFRYPLTGLIYVEFDSKMFPSGIPVISTKKKWKVVNVPSNYDPLSRTYSGSWDGTFKRAWTNNPAWVLYDLIINQRYGLDQRELGIPVDKWSLYEVAQYCDQRVPDGKGGDEPRYFCDMVVQSQVEAYTLIRDVCSIFRGMSFWNGESLSIIIDKPREPSYIFNNSNVVNGDFSYVMASEKSMYTSCNVTFDDEQNMYQQDLEPVFDYEAALRFGSNPTSFTAIGCVRRSEANRRGRWVLKTNLRSTVINFATGLEGMIPMVGDVIAVADNFWQSNLDLNLSGRIVEVSGFQVFLPFKVDARPGDFIMVNRPDGSPVKRTISSISGDGKTLTLNVGFGFVPQPDTAFLIERTDIAPALYVVSSVKKGDGDEEFTFSISGVQYDPNKYDEVDFGVSIEDRPTSILTPDVLPVPTGINISSYSRIVQGMSVETMVVSWDKMQYATFYEMQWRKDDGNWNNTPQTVANEIDVEGIYTGNYFVRVRTIGATGTSSGWSPIVSAALTGKVGEPGAPINLIATTDEVFGIRVKWGFAPGSGDTAYTELQQSPDGQVEGATLLSMVPYPQYDYWHSILPAGYVDWYRVRTVDRIGNVSPWTEFVRGMATDDFDKIAEVVKIDIENSEGFKDLVENAASTAVKVKEQAQTDIQNALAQDYNMKWTRVENGKRKAEYGTALELIANETEARVTQVEELRVEIDENINAKITNLQEVVATESETRARQVSELTAQMEDSNASIGVLREAIATETEARVQSVELLDAKVADNEASITTTRQALATETEARTTAIQALSTRVGNTEAAVVNKVDSWINASGIGASATVKLGLKYNGVEYAAGYNLQLTQINGVTLAQTVWDVDRFAVGRISGGTIASLPFFIENNQVFMQSAIIKDGTISNAKIGNYIQSNNFVANTQGWQLDKNGNFQNNGSVAGQGRMTMTNNQISVYDGNGVLRVRMGQL
Physico‐chemical
properties
protein length:1163 AA
molecular weight: 128628,85850 Da
isoelectric point:4,84759
aromaticity:0,09286
hydropathy:-0,27489

Domains

Domains [InterPro]
DC_0014
STR
1–1163
DC_0014
IPR053171
Unmapped
3–862
IPR053171 Coil IPR015406
IPR055385
ATT
86–212
IPR055385 IPR032876 IPR013783
IPR036116
STR
639–710
IPR036116
QXG07660.1
1 1163
Architecture
STR
ATT
STR
ATT
STR
STR 1-85 | ATT 86-212 | STR 213-334 | ATT 335-499 | STR 500-1163
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXG07660.1
1 1163
Domain Start End Length (AA) Confidence
N-terminal 1 506 506 0,9181
Central domain 507 1106 601 0,0260
C-terminal 1107 1163 56 0,9020
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-506
Central
507-1106
C-terminal
1107-1163

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage Snitter
[NCBI] 		2851075 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia sp.
[NCBI] 		558 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXG07660.1 [NCBI]
Genbank nucleotide accession
MZ333132.1 [NCBI]
CDS location
range 20297 -> 23788
strand -
CDS
ATGAATCAAAAACGTGTTACAGGCTCTAAAGGTGGTGAGTCAAAACCTTACACGCCGATAGAGATGGCTGATAACCTTATCTCCATCAACAAAATCAAAATCTTACTTGCTGTTTCTGACGGCGAAGTTGATAGCGAGTTCCGTCGAGGCATGGTCATGTTCAACGATGTTAGCCTTGATAGCTACCCTGACGTTGTTGCAGAGTTTAGGCCAGGCACGCAGACACAAGGTTACATCAAAGGGTTCGCCGACACCTCAAGCGAGATAACTGTTAACAGGGCGCTTACCACGACAAACCCCTTCGTTTACTCAATCACTAACAAAGTGATCTCTGCAACGCGCGTTAAAATAATGGCACCTCGCCTTGTTCAGGCAAAGAGCAACGGAGACAGGGTTGGGGTAAGAGTTAATTACAAGATTGAAATCGCTGTCGATGGCGCACCTTACCAGACTGTTATTGACGACGTGATCCAGGGAAAGAACACAACTACCGGATACGACAGAACGCGGCGTGTTAACCTTCCGGCATTCAACAACCAGGTTTTAGTAAGGGTTAGTCGCATAACGGCGGATAGCACCGATTCAAACCTTGTTGATGCAATCCAGGTTCAGAGCTATGCCGAAGTAGTTGATGCAAAGTTCCGTTATCCGCTGACCGGGCTGATTTACGTTGAGTTTGATTCGAAGATGTTCCCGAGTGGAATCCCGGTAATCTCCACTAAAAAGAAGTGGAAAGTTGTTAACGTGCCGAGCAATTACGATCCGCTATCAAGGACTTACTCTGGATCGTGGGATGGAACATTTAAGCGGGCATGGACGAATAATCCGGCGTGGGTTCTTTATGACCTGATCATTAATCAGCGCTACGGATTAGATCAGAGAGAGCTGGGAATCCCGGTTGATAAGTGGTCGCTCTATGAGGTTGCTCAGTATTGCGATCAGCGAGTGCCAGACGGGAAAGGCGGCGATGAGCCTCGTTACTTCTGCGACATGGTTGTTCAAAGCCAGGTAGAGGCTTACACGTTGATTCGTGACGTGTGCTCCATCTTCAGGGGAATGTCATTCTGGAACGGCGAGAGCCTGTCAATAATTATCGACAAGCCAAGGGAGCCAAGCTACATCTTCAACAACTCAAACGTTGTTAACGGAGATTTCAGTTATGTAATGGCTAGCGAAAAGAGCATGTACACTTCCTGCAACGTCACCTTCGACGATGAGCAGAACATGTACCAGCAGGATCTTGAGCCTGTTTTTGATTATGAAGCAGCACTTAGATTCGGGAGCAACCCAACCAGCTTTACTGCGATCGGGTGCGTTCGGCGAAGTGAGGCAAACAGAAGGGGGCGCTGGGTACTGAAGACTAACCTGCGCAGCACTGTAATCAACTTTGCTACGGGGCTTGAGGGAATGATCCCGATGGTTGGCGACGTTATCGCCGTCGCGGATAACTTCTGGCAAAGCAACCTTGACCTTAACCTTTCTGGAAGGATTGTAGAGGTTTCAGGATTTCAGGTATTTCTTCCGTTTAAGGTTGACGCCAGGCCGGGTGATTTCATCATGGTTAACAGGCCCGACGGAAGCCCGGTAAAGCGCACAATATCCAGCATATCTGGAGACGGAAAAACACTGACGCTTAACGTTGGTTTTGGTTTTGTTCCACAGCCAGATACGGCTTTCCTTATTGAGCGTACAGACATTGCCCCGGCGCTGTATGTTGTATCATCTGTTAAGAAGGGTGACGGCGACGAAGAGTTCACTTTCAGCATCAGCGGAGTACAGTACGATCCGAATAAATATGATGAGGTTGATTTCGGCGTCAGCATTGAAGACAGACCTACAAGCATCCTAACGCCAGACGTGCTGCCTGTTCCGACTGGAATTAACATCAGCTCTTACTCTCGCATTGTTCAGGGGATGAGCGTCGAAACGATGGTGGTATCTTGGGACAAAATGCAGTATGCAACGTTCTATGAGATGCAGTGGCGAAAGGATGATGGAAACTGGAATAACACGCCGCAGACTGTTGCTAACGAGATCGATGTTGAGGGTATTTATACCGGGAACTATTTCGTTAGGGTGAGAACTATCGGAGCAACGGGAACTTCCTCTGGATGGTCGCCTATCGTATCGGCAGCGTTAACGGGTAAAGTTGGGGAGCCTGGCGCACCGATAAACCTGATCGCCACAACTGATGAGGTTTTCGGAATCCGCGTTAAATGGGGCTTTGCTCCTGGCTCTGGAGATACTGCTTACACCGAGTTGCAGCAATCACCAGACGGGCAAGTTGAAGGCGCAACCTTACTTTCGATGGTTCCTTATCCGCAGTACGATTACTGGCATAGCATTCTTCCGGCTGGCTACGTTGACTGGTATCGCGTAAGGACTGTTGACCGAATCGGAAACGTATCACCCTGGACTGAGTTTGTTAGGGGAATGGCAACGGACGACTTCGACAAGATTGCGGAAGTGGTTAAGATCGATATCGAAAACAGTGAGGGCTTTAAAGATCTGGTTGAGAACGCCGCATCTACAGCCGTCAAGGTCAAGGAACAGGCTCAGACTGACATACAGAATGCGCTAGCCCAAGACTACAATATGAAATGGACGCGCGTAGAGAACGGCAAGAGAAAGGCAGAGTACGGAACAGCGCTTGAGCTTATCGCTAACGAGACGGAAGCAAGGGTTACTCAGGTTGAAGAGCTTAGGGTTGAGATCGACGAGAATATCAACGCCAAGATAACAAACCTGCAAGAGGTTGTTGCTACAGAGTCAGAAACGAGAGCGCGGCAGGTCAGCGAATTAACCGCTCAGATGGAAGATTCGAATGCAAGTATCGGAGTTCTTCGTGAGGCGATCGCTACAGAGACTGAGGCTCGCGTTCAGTCTGTTGAGTTGCTCGACGCGAAGGTTGCTGATAATGAGGCTTCAATCACCACGACAAGGCAAGCTCTTGCAACAGAGACGGAGGCAAGGACTACAGCAATTCAGGCTCTTAGCACGCGAGTTGGGAACACAGAGGCGGCTGTTGTTAACAAGGTTGACTCATGGATTAACGCAAGCGGAATCGGGGCTAGCGCAACGGTCAAGTTAGGTCTGAAGTATAACGGCGTTGAGTACGCGGCAGGATACAACCTCCAGCTCACTCAGATTAACGGCGTGACTTTGGCTCAAACGGTTTGGGATGTAGATCGCTTTGCTGTTGGTCGAATCTCTGGCGGAACCATCGCAAGCTTGCCATTCTTCATAGAAAACAATCAAGTTTTCATGCAGAGCGCAATTATTAAAGATGGTACAATTAGCAATGCGAAAATAGGAAATTACATTCAGTCAAACAACTTTGTAGCTAACACTCAGGGTTGGCAACTGGATAAAAACGGCAACTTCCAGAACAACGGAAGCGTAGCTGGTCAAGGTCGAATGACTATGACCAATAATCAAATCAGCGTGTATGACGGAAACGGAGTGCTACGCGTAAGAATGGGGCAATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bcdcde7906b75e23d19dd47c9b0e8bd83cf9dde3a4425c970f3242c16f84c455
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7666
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three novel Erwinia phages isolated from Organic waste Alanin,K.W.S., Djurhuus,A.M., Olsen,N.S., Carstens,A.B., Nielsen,T.K., Kot,W. and Hansen,L.H. 2023-01-20 — GenBank