Protein

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Genbank accession
WNV48172.1 [GenBank]
Protein name
tubular tail protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKVSGSYESVVRGVSEQVPQDRRPGQHKAQMNMISDPVRGLARRHGSVMLQEKVLAAVDDTKWAAWLTDTAQHKSFPFFIGGVEYDLIYRTQAWAGGGSVSSDTTFLMAFNKDTNQFLPVVAHADTATLKSGGVSAIVNVGKYIFLAGNTIVPTYTGTDRWNDTANLQKLAVWIRGGNYSRTYKVTLTKTDNTKVTVSYKTKSSTYPNLLDTSDIPSTASDYQKQVNDRVNAYNGQVTKWIGDAVEDITPANIATKLATALTTAGITGCSTVGATLVIDNASIVECSTEDGGDGTLMYGVGKDVTNVDKVSATHWPGKIVRVRPKKNNGKDSLYLEALAKDGTTGAWTEVTWRECAGYTMLPVAPFCIATVKAGTLYVAATPATLTSIVGDPTPVFKTNEVGDDLTSPLPYFINKKIDYLGLFQDRLVIGSGAVLLFSRPGDYFNWFRSSVLTKQDDDPIEIYALGAEDDVIKYSTTYDRNMFLFGRRKQYSVNGRQPLTPSSANIVVSASHEDATDAAPQNSGNFVFYCKTRNGITSAHQVQQGQLADTPESFNISQQLDSYIQGKPVEIVATTAPNTVFIRTTAERNVLYTYAYLDTPAGNERLFDSWSKWRWHPDLGSIIGMSRHDGDLYVYMLRRGVDKDGASKVWIAAERFVLDTGISPRPYADSLRLLPAVTTPDANSFLHANQSIINSSWVAFPKTSLKPFIGVPWEKLSEFQTQYAATYTEAYVGVDYSDSTYVTPTNPYMRDKNGRAIVNGRLTLGRLSIGVADTGGLVVSLVTTSGQQVSANFNGRLLGRASDVLGSQPIVTTSVPAPVGREVREVEYTIQAKSFLPLTVTAIEWTGQYFNNVPRV
Physico‐chemical
properties
protein length:857 AA
molecular weight: 93667,27590 Da
isoelectric point:7,13548
aromaticity:0,09802
hydropathy:-0,23314

Domains

Domains [InterPro]
IPR058003
TTP
1–53
IPR058003 IPR058003
DC_0058
STR
1–857
DC_0058
WNV48172.1
1 857
Architecture
STR
STR 1-857
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNV48172.1
1 857
Domain Start End Length (AA) Confidence
N-terminal 1 156 156 0,6805
Central domain 157 355 200 0,3917
C-terminal 356 857 501 0,3417
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-156
Central
157-355
C-terminal
356-857

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage Quill_5.2
[NCBI] 		3075108 Uroviricota > Caudoviricetes > Autographivirales > Lullwatervirus > Lullwatervirus quill52
Host Caulobacter crescentus CB15
[NCBI] 		190650 Bacteria > Proteobacteria > Alphaproteobacteria > Caulobacterales > Caulobacteraceae > Caulobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNV48172.1 [NCBI]
Genbank nucleotide accession
OR260090 [NCBI]
CDS location
range 25629 -> 28202
strand +
CDS
ATGGCTAAGGTTTCCGGTTCTTACGAGAGCGTCGTAAGGGGCGTCTCGGAGCAAGTTCCGCAAGACCGCCGCCCCGGCCAGCATAAGGCACAGATGAACATGATCTCTGATCCTGTGCGCGGGCTGGCCCGCAGGCACGGTTCGGTCATGCTACAAGAGAAAGTTCTTGCTGCTGTTGACGATACTAAGTGGGCCGCTTGGCTTACGGACACGGCGCAGCACAAGAGCTTTCCCTTCTTCATCGGTGGTGTGGAATATGACCTGATCTACCGCACCCAGGCTTGGGCTGGTGGTGGCAGCGTTAGTTCTGATACTACCTTCCTAATGGCGTTCAACAAGGACACCAATCAGTTTCTTCCCGTCGTCGCACACGCAGACACTGCCACCCTCAAGAGCGGTGGGGTTAGCGCTATTGTCAACGTCGGCAAATACATCTTCCTGGCTGGGAATACTATCGTCCCAACCTACACTGGCACGGACAGGTGGAACGATACTGCTAATCTGCAAAAGCTGGCTGTTTGGATTAGGGGCGGGAACTATTCGCGTACCTACAAGGTAACCCTGACCAAGACAGATAACACCAAGGTCACTGTCAGCTACAAGACCAAGAGCAGCACCTACCCTAACCTGCTGGATACGTCGGACATTCCGTCTACGGCCTCTGACTATCAGAAGCAGGTTAACGACCGGGTTAATGCCTATAACGGGCAGGTCACTAAGTGGATTGGCGATGCGGTTGAGGATATCACTCCCGCAAACATCGCCACTAAACTCGCCACCGCCCTCACTACTGCTGGGATTACCGGTTGCTCTACCGTGGGCGCTACTCTGGTAATTGACAACGCCTCTATCGTTGAGTGCTCCACCGAAGACGGTGGGGACGGGACGCTTATGTACGGCGTCGGTAAGGATGTCACGAACGTTGACAAGGTTAGCGCTACGCACTGGCCGGGCAAGATCGTTCGGGTTCGACCCAAGAAGAACAACGGTAAGGACAGCCTATACCTTGAGGCCCTGGCTAAGGATGGAACTACTGGTGCTTGGACCGAAGTAACTTGGCGGGAGTGCGCTGGTTACACCATGCTTCCGGTTGCCCCGTTCTGCATAGCTACGGTTAAAGCCGGTACCTTGTACGTTGCTGCAACCCCGGCTACTTTGACCTCCATTGTTGGTGATCCAACTCCGGTCTTCAAGACCAATGAAGTTGGGGATGATCTAACATCTCCCCTCCCGTACTTCATCAACAAGAAGATTGACTACCTCGGACTATTCCAAGACCGGCTGGTCATTGGCTCCGGGGCCGTTCTTCTGTTCTCTAGGCCTGGGGACTATTTCAACTGGTTCCGCTCATCGGTGCTCACAAAGCAGGATGACGACCCGATTGAGATTTACGCCCTTGGTGCTGAAGATGACGTGATCAAGTACAGCACTACCTATGACCGGAATATGTTCCTGTTTGGTAGGCGCAAGCAATACAGCGTCAATGGCCGTCAGCCCCTTACGCCTAGCTCGGCTAACATCGTGGTCAGCGCCTCTCACGAGGATGCTACTGATGCAGCCCCGCAGAACTCTGGCAACTTCGTGTTCTACTGTAAGACCCGTAATGGTATTACGTCGGCGCACCAAGTGCAGCAAGGGCAGCTTGCGGATACCCCCGAGAGCTTCAACATCTCGCAGCAACTGGACAGCTATATCCAGGGCAAACCTGTTGAGATCGTGGCTACCACTGCCCCTAACACCGTGTTCATTCGTACTACCGCTGAGCGTAACGTCCTGTATACGTATGCGTATCTTGACACCCCAGCGGGTAACGAGCGTCTGTTTGATAGCTGGAGCAAGTGGCGTTGGCATCCTGACCTTGGCTCTATCATCGGTATGAGCCGACATGACGGAGACCTGTACGTCTATATGCTTCGCCGAGGCGTTGATAAGGATGGCGCTAGCAAGGTGTGGATCGCTGCCGAGCGCTTTGTGCTTGACACTGGAATTAGCCCTAGGCCGTACGCGGATAGTTTGCGTCTGCTTCCTGCGGTTACCACCCCGGACGCTAACTCTTTCCTGCACGCTAACCAAAGCATCATTAATAGTTCATGGGTGGCCTTCCCTAAGACCTCCCTCAAACCGTTCATTGGTGTTCCTTGGGAGAAGCTGTCGGAATTCCAGACGCAGTACGCTGCAACGTACACTGAGGCCTATGTCGGTGTTGACTACTCAGACAGCACCTATGTAACTCCGACCAATCCGTACATGAGGGATAAGAATGGACGTGCTATTGTCAATGGTCGTCTTACTCTTGGTCGCCTTAGTATCGGTGTTGCCGATACTGGCGGTCTGGTTGTTTCTCTGGTTACAACCAGTGGGCAACAAGTCAGCGCCAACTTTAACGGAAGACTGCTTGGCCGCGCATCAGACGTGCTTGGCTCTCAGCCTATTGTGACTACCTCCGTCCCAGCACCAGTTGGGAGAGAAGTCCGAGAAGTGGAGTATACCATTCAAGCCAAGAGCTTCCTACCGCTTACGGTTACCGCTATCGAGTGGACCGGACAGTATTTCAATAACGTTCCGAGGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0bda32bc0320d723129ea3317d7d90251e1e840b4fd67a9aa30fa69a4df7a843
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3211
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New Genera and Species of Caulobacter and Brevundimonas Bacteriophages Provide Insights into Phage Genome Evolution Ely,B., Hils,M., Clarke,A., Albert,M., Holness,N., Lenski,J. and Mohammadi,T. 2024 — GenBank