Protein

View in Explore
Genbank accession
XOD48431.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MAIKLSNNAVSRLAAELAQGDTQIILTPGDGSMFPTLSPGDFFQATLVKASGQYECVRATARDADTLTVLRAQENTQALHFASGDRIELRVTAGMFDLLQQSIDAKLDKAGGAVSGALAVSGAITQAGNPVWHAGNLTPGSYAALAGASFTGNVVSAPLPAPMAVNDSNGPLRVQNNGGTGDNNFAGMVFLATNQYGIKLGVRHDGYFGLGGWSRAAWSWYSDPSGNMVAAGNVSAYSDPRLKDDVERISGALALVEQLDGVRFTWNGKTALIGKPGARDVGVLADQVEAVLPEAVGRSVPDEENGGERWRVVDYTKLVPLLVEAVKELAGIVKRKGV
Physico‐chemical
properties
protein length:338 AA
molecular weight: 35354,41390 Da
isoelectric point:5,33112
aromaticity:0,06805
hydropathy:-0,04793

Domains

Domains [InterPro]
DC_1952
STR
1–328
DC_1952
IPR030392
CHP
238–338
IPR030392
IPR030392
CHP
238–296
IPR030392
XOD48431.1
1 338
Architecture
STR
CHP
STR 1-328 | CHP 329-338
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage YL1
[NCBI] 		3390401 No lineage information
Host Ralstonia pseudosolanacearum
[NCBI] 		1310165 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD48431.1 [NCBI]
Genbank nucleotide accession
PQ295876.1 [NCBI]
CDS location
range 53228 -> 54244
strand +
CDS
ATGGCTATCAAGCTGTCCAACAATGCAGTTTCCCGTCTTGCCGCCGAGCTGGCGCAGGGCGACACCCAAATCATCCTGACGCCGGGCGACGGCAGCATGTTCCCGACACTCAGCCCCGGAGATTTCTTCCAGGCCACGCTCGTGAAGGCGTCGGGCCAGTACGAGTGCGTGCGGGCCACCGCGCGCGACGCCGACACGCTGACTGTGCTGCGCGCCCAGGAGAACACCCAGGCGCTGCACTTCGCCTCCGGAGATCGGATCGAGCTGCGCGTCACGGCCGGCATGTTTGACCTGTTGCAGCAGAGCATCGACGCGAAGCTTGACAAGGCCGGCGGCGCGGTGTCTGGCGCTCTCGCAGTCTCCGGGGCAATCACCCAGGCCGGCAATCCGGTTTGGCACGCCGGCAACCTGACGCCGGGCAGCTATGCTGCGCTCGCCGGCGCGAGCTTCACCGGCAACGTAGTGAGCGCGCCTTTGCCCGCACCGATGGCCGTCAATGACTCGAACGGCCCTCTCCGCGTGCAGAACAACGGCGGCACGGGCGACAACAATTTCGCGGGCATGGTGTTCCTTGCCACGAACCAGTACGGCATCAAACTCGGCGTGCGCCATGACGGCTATTTCGGCCTGGGCGGATGGTCGCGCGCGGCGTGGTCGTGGTACTCGGACCCGAGCGGCAACATGGTGGCGGCCGGAAACGTCTCGGCCTATTCCGATCCGCGCCTGAAAGATGACGTCGAGCGCATCAGCGGCGCGCTGGCGCTGGTCGAGCAGCTCGACGGCGTGCGCTTCACCTGGAACGGAAAGACGGCGCTGATCGGCAAGCCGGGCGCACGCGACGTCGGCGTGCTGGCTGATCAGGTCGAAGCGGTGCTTCCCGAGGCCGTGGGCCGCTCTGTGCCCGACGAGGAGAACGGCGGCGAGCGATGGCGCGTCGTCGACTACACCAAGCTGGTGCCGCTCCTGGTCGAGGCAGTGAAGGAGCTGGCCGGCATCGTCAAGCGCAAGGGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5c6861d241b6e59aa5b266981e54ef63e504517c439755dd24cb2f5c0049e9a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8289
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Development of a Virulent Phage Cocktail Formula and Evaluation for Control of Tobacco Bacterial Wilt Disease He,H. 2025-03-13 — GenBank