Protein

Genbank accession
AUR87569.1 [GenBank]
Protein name
collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,91
TF
Evidence Phold
Probability 1,00
Protein sequence
MDVYVDRVEKATKNAENGAEVLKDVSEKYTKVYQDVLDNIHKLKGEKGEQGIQGEKGDQGEQGIQGAIGEQGEIGPEGKQGIQGIQGKQGIQGETGPQGLQGEKGEKGATGPQGIQGNVGPEGQQGGFGPKGDQGPIGPIGVQGKVGPIGPKGSTGATGPQGIQGIKGDKGDQGNNGTSFQVHAVDIYDKRSDYDNERKNFSFYAIDYSTVSDNGKVSTFKRFTGDGVNKDFEIPWKPDGIETLILVVGGVTQGTDTYSVKNSSLNSTTISLNEAPPSGVSLSVRELIQAQGTGTLFIKASDKIGDWSAPIPFGRGPIGEKGVKGDQGSKGPQGATGATGARGPQGLQGPQGIKGVQGPSGARGEAGEKGDQGSVGVRGPQGATGEAGATGARGPQGLQGPQGIKGVQGDQGEEGVKGEKGDQGLRGPIGIQGPQGLRGPQGPQGPTGNKGATGAKGATGSQGPDGDAGRSMEAAVYVSRSPYTLQPVEGRLTQYTLFEGKLQKSESYGRYLLVDNFRAMIKRTTGALLSNTSIYADLVVTYRGKEFVQTMRWDFNGSYWINANQDEYYNLPPCIVDIPENTTGTFSVKLRVRGSGSGFYPIMVNWGAGSSRPDGQVDNLVSLFARGSSLGKV
Physico‐chemical
properties
protein length:633 AA
molecular weight: 65669,76150 Da
isoelectric point:6,34735
aromaticity:0,06319
hydropathy:-0,66493

Domains

Domains [InterPro]
IPR008160
45–99
IPR008160 IPR008160 IPR050149
IPR008160
316–374
IPR008160 IPR008160
AUR87569.1
1 633
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.101.O._10N.261.45.C6
[NCBI] 		2070725 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR87569.1 [NCBI]
Genbank nucleotide accession
MG592473 [NCBI]
CDS location
range 94518 -> 96419
strand +
CDS
ATGGATGTTTATGTAGATAGGGTAGAAAAAGCTACAAAAAACGCTGAAAATGGTGCCGAGGTACTTAAAGATGTTTCAGAAAAATATACTAAAGTTTACCAAGATGTTTTAGACAATATTCACAAATTAAAAGGTGAAAAAGGTGAACAAGGTATCCAAGGAGAAAAGGGTGACCAAGGTGAACAGGGTATCCAAGGAGCTATCGGAGAACAAGGTGAAATTGGCCCTGAAGGAAAGCAAGGTATTCAGGGTATCCAAGGAAAGCAAGGTATTCAGGGTGAGACTGGGCCTCAAGGGTTACAAGGGGAAAAAGGAGAAAAAGGAGCAACTGGCCCTCAAGGTATCCAAGGTAATGTAGGTCCAGAAGGACAGCAAGGGGGTTTCGGTCCAAAAGGTGACCAAGGTCCTATCGGACCTATAGGTGTTCAGGGTAAAGTAGGTCCTATCGGCCCGAAAGGGTCTACAGGAGCAACTGGTCCTCAAGGTATACAAGGTATTAAGGGTGATAAAGGGGACCAAGGTAACAACGGTACATCATTTCAAGTACATGCTGTAGATATTTATGATAAAAGATCGGACTACGACAATGAAAGAAAGAATTTTTCATTCTACGCAATTGATTATTCTACGGTCTCTGATAATGGTAAAGTATCTACTTTTAAAAGGTTCACAGGAGACGGGGTAAATAAAGATTTTGAAATACCTTGGAAACCTGACGGTATAGAAACTCTGATCTTGGTGGTTGGAGGGGTAACACAAGGTACTGACACTTATTCAGTTAAAAACTCTTCACTTAATTCTACAACTATATCTTTAAATGAAGCACCTCCTTCTGGTGTATCTCTGAGTGTAAGAGAATTAATACAAGCTCAAGGAACAGGAACTCTTTTTATAAAAGCCTCTGATAAGATTGGAGATTGGTCAGCACCCATACCTTTTGGTAGGGGTCCTATAGGTGAAAAAGGCGTTAAAGGCGACCAAGGATCAAAAGGACCACAGGGGGCTACTGGAGCAACTGGAGCAAGGGGTCCACAAGGTTTACAAGGACCACAGGGTATTAAAGGTGTTCAAGGACCTTCTGGTGCTAGAGGTGAAGCTGGGGAGAAAGGTGATCAAGGTTCTGTTGGTGTCAGAGGCCCACAAGGCGCTACTGGAGAAGCTGGAGCAACTGGAGCAAGGGGTCCACAAGGTTTACAAGGACCACAGGGTATTAAAGGTGTTCAAGGTGACCAAGGTGAAGAAGGTGTAAAGGGAGAGAAAGGTGATCAAGGTTTAAGAGGTCCTATAGGTATCCAAGGTCCACAAGGTTTAAGAGGTCCACAGGGGCCACAAGGACCGACTGGTAATAAGGGAGCTACAGGCGCTAAAGGTGCTACAGGGTCTCAAGGCCCAGATGGTGATGCAGGCAGATCAATGGAAGCTGCGGTCTATGTATCCAGAAGTCCTTATACACTCCAACCTGTAGAAGGTAGGTTAACTCAATATACTCTTTTCGAAGGTAAGTTGCAAAAATCAGAGAGCTATGGAAGATATCTTTTGGTTGATAATTTCAGAGCTATGATTAAAAGGACTACAGGAGCACTTCTTTCGAATACAAGTATATATGCAGATTTAGTTGTAACCTATAGGGGAAAAGAATTCGTACAGACTATGAGGTGGGATTTTAATGGAAGTTATTGGATAAATGCAAATCAGGATGAATATTATAACCTACCACCTTGTATTGTGGATATACCAGAAAATACAACAGGAACTTTTTCTGTAAAATTAAGAGTGAGAGGCTCAGGTTCTGGGTTTTATCCTATTATGGTTAATTGGGGTGCTGGTTCTTCTAGACCTGATGGTCAGGTAGATAATTTAGTTTCTCTTTTTGCTAGAGGTTCCTCTCTTGGGAAAGTGTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
c9627112126bbbc1af12ed3de6c75f1806bd3d25d1dbca9daec3efa51f8be6a1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6010
Evidence 0,6010
Download PDB

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank