Protein

View in Explore
Genbank accession
AUR87569.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MDVYVDRVEKATKNAENGAEVLKDVSEKYTKVYQDVLDNIHKLKGEKGEQGIQGEKGDQGEQGIQGAIGEQGEIGPEGKQGIQGIQGKQGIQGETGPQGLQGEKGEKGATGPQGIQGNVGPEGQQGGFGPKGDQGPIGPIGVQGKVGPIGPKGSTGATGPQGIQGIKGDKGDQGNNGTSFQVHAVDIYDKRSDYDNERKNFSFYAIDYSTVSDNGKVSTFKRFTGDGVNKDFEIPWKPDGIETLILVVGGVTQGTDTYSVKNSSLNSTTISLNEAPPSGVSLSVRELIQAQGTGTLFIKASDKIGDWSAPIPFGRGPIGEKGVKGDQGSKGPQGATGATGARGPQGLQGPQGIKGVQGPSGARGEAGEKGDQGSVGVRGPQGATGEAGATGARGPQGLQGPQGIKGVQGDQGEEGVKGEKGDQGLRGPIGIQGPQGLRGPQGPQGPTGNKGATGAKGATGSQGPDGDAGRSMEAAVYVSRSPYTLQPVEGRLTQYTLFEGKLQKSESYGRYLLVDNFRAMIKRTTGALLSNTSIYADLVVTYRGKEFVQTMRWDFNGSYWINANQDEYYNLPPCIVDIPENTTGTFSVKLRVRGSGSGFYPIMVNWGAGSSRPDGQVDNLVSLFARGSSLGKV
Physico‐chemical
properties
protein length:633 AA
molecular weight: 65669,76150 Da
isoelectric point:6,34735
aromaticity:0,06319
hydropathy:-0,66493

Domains

Domains [InterPro]
DC_0620
STR
14–127
DC_0620 DC_0620 DC_1453
IPR008160
STR
45–99
IPR008160 IPR008160 IPR050149
DC_1479
STR
122–175
DC_1479 IPR008160 IPR008160
AUR87569.1
1 633
Architecture
STR
STR
STR 14-397 | STR 406-622 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.101.O._10N.261.45.C6
[NCBI] 		2070725 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterovibrio norvegicus
[NCBI] 		188144 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR87569.1 [NCBI]
Genbank nucleotide accession
MG592473.1 [NCBI]
CDS location
range 94518 -> 96419
strand +
CDS
ATGGATGTTTATGTAGATAGGGTAGAAAAAGCTACAAAAAACGCTGAAAATGGTGCCGAGGTACTTAAAGATGTTTCAGAAAAATATACTAAAGTTTACCAAGATGTTTTAGACAATATTCACAAATTAAAAGGTGAAAAAGGTGAACAAGGTATCCAAGGAGAAAAGGGTGACCAAGGTGAACAGGGTATCCAAGGAGCTATCGGAGAACAAGGTGAAATTGGCCCTGAAGGAAAGCAAGGTATTCAGGGTATCCAAGGAAAGCAAGGTATTCAGGGTGAGACTGGGCCTCAAGGGTTACAAGGGGAAAAAGGAGAAAAAGGAGCAACTGGCCCTCAAGGTATCCAAGGTAATGTAGGTCCAGAAGGACAGCAAGGGGGTTTCGGTCCAAAAGGTGACCAAGGTCCTATCGGACCTATAGGTGTTCAGGGTAAAGTAGGTCCTATCGGCCCGAAAGGGTCTACAGGAGCAACTGGTCCTCAAGGTATACAAGGTATTAAGGGTGATAAAGGGGACCAAGGTAACAACGGTACATCATTTCAAGTACATGCTGTAGATATTTATGATAAAAGATCGGACTACGACAATGAAAGAAAGAATTTTTCATTCTACGCAATTGATTATTCTACGGTCTCTGATAATGGTAAAGTATCTACTTTTAAAAGGTTCACAGGAGACGGGGTAAATAAAGATTTTGAAATACCTTGGAAACCTGACGGTATAGAAACTCTGATCTTGGTGGTTGGAGGGGTAACACAAGGTACTGACACTTATTCAGTTAAAAACTCTTCACTTAATTCTACAACTATATCTTTAAATGAAGCACCTCCTTCTGGTGTATCTCTGAGTGTAAGAGAATTAATACAAGCTCAAGGAACAGGAACTCTTTTTATAAAAGCCTCTGATAAGATTGGAGATTGGTCAGCACCCATACCTTTTGGTAGGGGTCCTATAGGTGAAAAAGGCGTTAAAGGCGACCAAGGATCAAAAGGACCACAGGGGGCTACTGGAGCAACTGGAGCAAGGGGTCCACAAGGTTTACAAGGACCACAGGGTATTAAAGGTGTTCAAGGACCTTCTGGTGCTAGAGGTGAAGCTGGGGAGAAAGGTGATCAAGGTTCTGTTGGTGTCAGAGGCCCACAAGGCGCTACTGGAGAAGCTGGAGCAACTGGAGCAAGGGGTCCACAAGGTTTACAAGGACCACAGGGTATTAAAGGTGTTCAAGGTGACCAAGGTGAAGAAGGTGTAAAGGGAGAGAAAGGTGATCAAGGTTTAAGAGGTCCTATAGGTATCCAAGGTCCACAAGGTTTAAGAGGTCCACAGGGGCCACAAGGACCGACTGGTAATAAGGGAGCTACAGGCGCTAAAGGTGCTACAGGGTCTCAAGGCCCAGATGGTGATGCAGGCAGATCAATGGAAGCTGCGGTCTATGTATCCAGAAGTCCTTATACACTCCAACCTGTAGAAGGTAGGTTAACTCAATATACTCTTTTCGAAGGTAAGTTGCAAAAATCAGAGAGCTATGGAAGATATCTTTTGGTTGATAATTTCAGAGCTATGATTAAAAGGACTACAGGAGCACTTCTTTCGAATACAAGTATATATGCAGATTTAGTTGTAACCTATAGGGGAAAAGAATTCGTACAGACTATGAGGTGGGATTTTAATGGAAGTTATTGGATAAATGCAAATCAGGATGAATATTATAACCTACCACCTTGTATTGTGGATATACCAGAAAATACAACAGGAACTTTTTCTGTAAAATTAAGAGTGAGAGGCTCAGGTTCTGGGTTTTATCCTATTATGGTTAATTGGGGTGCTGGTTCTTCTAGACCTGATGGTCAGGTAGATAATTTAGTTTCTCTTTTTGCTAGAGGTTCCTCTCTTGGGAAAGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c9627112126bbbc1af12ed3de6c75f1806bd3d25d1dbca9daec3efa51f8be6a1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6010
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank