Protein

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Genbank accession
CAL9993047.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MAETKKPFYTGNGMKVDGDLDFTDNVLIGKKLSFGNDGKLILRKHSNAGGIENECRLNATTGDFEVFDTIWKSAFVGGLKWDAAEAQFTITRLTDNKKLVVPYVHETDSILKNVQYYQAEAAGTAAKPSYGLKDNAGDGMFFISDGVAFAGGGKDLFQADTTSFRLKYGDNGAEIFVANSTGISSKVNFTADSTFNAKGKSEFEDDVTISNGDLDITSGRVLSGGNVIGFSDERIKDDFQAIENAVERILRMEGVTYHNLVTGKREAGLKAQQVREALAEAVTSTGKDIKLLTGEEIENVLAVAYGNLAGLWVEGFRELDKRLKSVEDLCSKDQDK
Physico‐chemical
properties
protein length:336 AA
molecular weight: 36500,34810 Da
isoelectric point:4,92342
aromaticity:0,08929
hydropathy:-0,34940

Domains

Domains [InterPro]
DC_1202
STR
4–332
DC_1202
IPR030392
CHP
231–330
IPR030392
IPR030392
CHP
231–283
IPR030392
CAL9993047.1
1 336
Architecture
STR
STR 4-332 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAL9993047.1
1 336
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1696
Central domain 11 209 200 0,1626
C-terminal 210 336 126 0,9862
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-336

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D504
[NCBI] 		3105268 Viruses > unclassified bacterial viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAL9993047.1 [NCBI]
Genbank nucleotide accession
OZ195880.1 [NCBI]
CDS location
range 145545 -> 146555
strand +
CDS
ATGGCTGAAACTAAGAAGCCCTTCTACACCGGAAACGGTATGAAGGTAGACGGTGATCTCGACTTCACCGACAATGTTCTTATAGGTAAAAAATTATCGTTCGGTAATGATGGTAAGTTAATTCTGCGTAAACATTCTAACGCAGGAGGCATCGAGAACGAATGTAGACTTAATGCCACGACAGGGGATTTTGAAGTATTTGACACGATATGGAAGAGTGCGTTTGTTGGTGGGTTGAAATGGGATGCGGCTGAAGCCCAGTTTACTATCACACGCCTTACTGACAATAAGAAGTTGGTGGTTCCGTATGTACACGAAACTGATTCTATATTGAAGAATGTTCAATACTATCAAGCGGAAGCAGCAGGCACGGCGGCTAAACCGTCTTACGGCCTTAAAGATAACGCTGGTGATGGGATGTTCTTCATTAGCGATGGTGTTGCGTTTGCGGGCGGCGGTAAAGATCTATTCCAAGCAGACACGACATCATTCAGGCTAAAATATGGTGATAACGGCGCTGAGATATTCGTAGCCAATAGTACAGGTATATCTTCAAAGGTTAACTTCACAGCGGATTCCACGTTCAATGCTAAGGGTAAATCCGAGTTTGAAGATGACGTTACTATTTCTAATGGTGATCTTGATATCACATCAGGCCGTGTATTGTCTGGTGGTAACGTTATAGGCTTCTCCGATGAACGAATCAAAGACGATTTCCAAGCCATAGAGAACGCCGTCGAACGCATTCTAAGGATGGAAGGTGTTACGTACCACAATCTGGTAACTGGTAAAAGAGAAGCTGGTCTGAAGGCACAACAAGTCCGAGAAGCACTGGCTGAAGCGGTCACCAGCACGGGCAAGGACATCAAGCTGCTTACTGGTGAAGAAATTGAAAACGTTTTGGCGGTTGCGTATGGTAACCTTGCTGGTCTATGGGTGGAGGGTTTCCGCGAATTGGACAAGCGTCTTAAATCTGTGGAGGATCTATGTTCAAAAGATCAGGACAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
af540b4b77df16207c6788c3a4141fdc8ad6dd035725c38f43f9153b381211ce
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6887
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50