Protein

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Genbank accession
XYH92106.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,60
Protein sequence
MGPNDTISIQRVEANITASEPANSSGGIYVSRNRNQDGSEKSAAMFYNETQADISKFTIGVFQKDKTTRYYQFDINGRVSGIENLIASNISAGSINLNYGHTLSINPGEQNALQISNFVAGIDTWCGYTRYNWYNDYAIAGLVRGGSTHVSDYRIEVYSPGVDAYSFQFFPQGKLRGASFNARCTQGGWSLDLDENTHAVPFNARSIGNNNGGWVPIVSGGYATPGGYRIRAAFGAISPGTSGWGRAVIKIQGDNEFYRGFEFHASGNLTTWANSPSDAWGGAFEFTKSPSSDRDLKKDITYTNGKEAYDRVMQWLPTLFKYKGQTIQRYGFIAQDLMRVDPQYVKLVPGAPIFEDVVGINEAGEEYVHHQIETGVHDDTLALDSNVMLVDLGAAVIYMDKEMKSQRKELEELKALVATLVNK
Physico‐chemical
properties
protein length:423 AA
molecular weight: 46629,25790 Da
isoelectric point:5,47851
aromaticity:0,11584
hydropathy:-0,40213

Domains

Domains [InterPro]
DC_0195
STR
4–423
DC_0195
IPR030392
CHP
292–346
IPR030392 Coil
IPR030392
CHP
292–410
IPR030392
XYH92106.1
1 423
Architecture
STR
STR 4-423
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYH92106.1
1 423
Domain Start End Length (AA) Confidence
N-terminal 1 50 50 0,4477
Central domain 51 249 200 0,2504
C-terminal 250 423 173 0,9944
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-50
Central
51-249
C-terminal
250-423

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage INF11
[NCBI] 		3433623 Viruses >
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH92106.1 [NCBI]
Genbank nucleotide accession
PV692321.1 [NCBI]
CDS location
range 29117 -> 30388
strand -
CDS
ATGGGACCTAATGATACTATAAGTATTCAGCGTGTAGAAGCTAATATAACTGCGAGTGAACCAGCTAATTCTAGTGGAGGAATTTATGTTTCTCGAAACCGTAATCAAGATGGTAGTGAGAAATCAGCAGCTATGTTTTATAATGAAACACAAGCTGATATATCAAAATTTACTATAGGAGTATTTCAAAAGGATAAAACTACTCGCTATTACCAGTTTGATATTAATGGAAGGGTATCAGGTATTGAAAATTTAATAGCTAGTAATATCAGTGCTGGTAGCATAAACCTAAATTATGGTCATACATTATCAATTAATCCTGGGGAGCAAAATGCACTACAGATTTCTAATTTTGTTGCAGGAATAGATACTTGGTGTGGATATACTAGATACAATTGGTATAATGACTATGCTATTGCTGGACTTGTTCGAGGAGGATCTACACATGTATCTGATTATAGAATAGAAGTTTATAGTCCTGGTGTTGATGCATATAGTTTTCAATTTTTCCCACAAGGTAAACTACGTGGTGCATCATTTAATGCTAGATGTACTCAAGGTGGGTGGTCATTAGACTTAGATGAAAATACTCATGCGGTTCCTTTTAATGCTAGAAGTATTGGGAATAATAATGGTGGATGGGTTCCAATTGTATCCGGTGGTTATGCAACTCCAGGCGGATATAGAATTCGCGCAGCATTTGGTGCTATTTCTCCTGGTACTAGTGGATGGGGACGAGCAGTCATAAAAATTCAGGGAGATAATGAATTTTATCGTGGTTTTGAATTTCATGCTAGTGGCAACTTAACCACATGGGCTAATTCTCCGAGTGATGCTTGGGGTGGTGCATTTGAATTTACTAAGTCACCCTCCTCAGATCGTGACCTAAAGAAAGATATTACTTATACTAACGGAAAGGAAGCATACGATCGTGTTATGCAGTGGTTACCAACGTTATTTAAGTATAAAGGACAAACAATACAACGTTATGGTTTTATAGCCCAGGACTTGATGAGAGTTGATCCCCAATATGTTAAATTAGTACCCGGTGCACCTATATTTGAGGATGTGGTTGGTATTAATGAGGCTGGAGAGGAATATGTACACCATCAAATTGAAACTGGTGTTCATGATGATACCCTAGCTCTGGATAGTAATGTAATGTTGGTTGATTTAGGTGCTGCCGTAATCTATATGGATAAAGAGATGAAGAGCCAGCGTAAAGAGTTGGAAGAGTTAAAAGCTCTAGTAGCTACTCTAGTTAACAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
306eda5580f522c33ddaebc90077fca56d45d9edae7d47f236e040a4a5223d6b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8482
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50