Protein

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Genbank accession
AIA64564.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYPFAIINFAGGGPTPGEQGLKTFLKGGDTYFALGHNGDLYVMGASTGNGLGKTGTTFNPSTGGWTITNTGVEQIYGNLNMGCLLKKNGSFYVTGYQNAFPINTAEEQNDWRLVDPSYYTVGGYSTFDNIVQFHQSFFLCADGNVYSCSTTGVTQVTSVPAGGIKYIHVSNDPDNKIIITNSGAVYAQGYNGQGKAIDAKGTVSTSWLGNTWKQVRDCTSDYEEAYTLQSRRRNGANTIMDRYNLILARKTDGSWWVSGTQGTGLGNASTSVNVMQAANIPNLSKVLVGEAYGYNWDTYDRNWYVTHQVFVENDNLAIHQSTGDQGTCYTLANGTSPGGNSTSLKNIEQVLIDEGGLQMVVPHAMNDRCRQNFLLTKAGNLYLTGQGVADPTTWPPGVPQTAFNNITAGYNIAGPFPMPDFG
Physico‐chemical
properties
protein length:422 AA
molecular weight: 45507,89450 Da
isoelectric point:5,34590
aromaticity:0,11374
hydropathy:-0,34621

Domains

Domains [InterPro]
DC_0433
ATT
1–135
DC_0433
IPR009091
STR
19–196
IPR009091
IPR009091
STR
26–216
IPR009091
DC_1778
STR
108–244
DC_1778
AIA64564.1
1 422
Architecture
ATT
STR
ATT 1-135 | STR 136-244 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIA64564.1
1 422
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0342
Central domain 11 214 205 0,3417
C-terminal 215 422 207 0,7890
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-214
C-terminal
215-422

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage CR8
[NCBI] 		1327934 Uroviricota > Caudoviricetes > Vequintavirinae > Certrevirus CR8 >
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIA64564.1 [NCBI]
Genbank nucleotide accession
KC954774 [NCBI]
CDS location
range 32797 -> 34065
strand +
CDS
ATGTACCCATTTGCTATTATCAATTTTGCAGGCGGTGGCCCTACCCCAGGAGAGCAGGGTCTCAAGACTTTCCTCAAGGGTGGAGACACTTACTTTGCCTTGGGCCACAATGGAGACCTGTACGTCATGGGTGCCTCCACTGGCAATGGCTTGGGTAAAACCGGGACGACATTCAATCCTTCCACTGGCGGGTGGACAATCACCAACACAGGTGTTGAACAAATCTACGGCAATCTCAACATGGGTTGCCTGCTGAAGAAGAACGGGTCTTTTTACGTAACAGGTTATCAGAACGCCTTTCCGATCAACACCGCTGAGGAGCAGAACGACTGGCGTCTTGTAGATCCCTCTTATTACACTGTCGGAGGATACAGCACCTTTGACAACATCGTTCAATTCCACCAGAGTTTCTTCTTGTGTGCCGACGGTAACGTGTACAGTTGCTCCACGACCGGGGTAACTCAAGTCACCTCCGTCCCCGCAGGTGGTATCAAGTACATCCATGTCTCTAACGACCCGGATAACAAGATTATAATCACAAATTCCGGCGCTGTCTATGCCCAAGGTTACAATGGTCAAGGAAAGGCTATTGATGCGAAAGGCACGGTATCCACATCTTGGCTGGGAAATACCTGGAAGCAGGTCCGTGACTGCACCTCTGACTACGAAGAAGCATATACCCTGCAATCTCGTCGCCGGAACGGTGCAAATACCATCATGGATCGCTATAACCTGATCTTGGCAAGAAAGACCGACGGATCTTGGTGGGTTTCTGGGACGCAGGGGACCGGATTGGGCAACGCATCTACATCGGTCAACGTCATGCAGGCGGCAAATATCCCTAATCTGAGCAAGGTACTGGTAGGAGAGGCATATGGGTACAACTGGGACACTTATGACCGAAACTGGTACGTAACTCACCAAGTATTTGTTGAGAATGACAATCTGGCAATCCATCAGTCTACAGGGGACCAAGGCACCTGCTATACCTTGGCAAACGGAACATCCCCGGGAGGCAACTCGACAAGCCTGAAGAACATTGAACAGGTTCTTATCGACGAGGGTGGGTTGCAAATGGTTGTTCCTCATGCAATGAACGACAGATGTCGTCAGAACTTCCTTTTGACCAAGGCGGGTAACCTGTACCTGACCGGGCAGGGTGTTGCAGACCCTACTACGTGGCCCCCGGGGGTCCCGCAAACGGCATTCAACAACATCACTGCCGGGTACAATATCGCAGGACCATTCCCAATGCCAGATTTTGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3af3a8160e8cd0bdaa62a50248a5599c6d0f20117f73b492992aef2e97b674f4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6154
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Cronobacter sakazakii Bacteriophage CR8 Kim,Y., Shin,H. and Ryu,S. 2012-06 — GenBank