Protein

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Genbank accession
QCW19520.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MNNVVISGSKAGESEQHTPVEAPNDLRSVATARILLALGEGEFEGGVNEKSIYLDGTPLMSQNGTINFPGVKWDFRSGTVDQQYIQGFPAVESETAIGVELKSDAPWTRSFNDGQISAVIIRFRWPSLQEQKDNGDVVGYSIDYRVEVSTDGGPYIVASQQGVTGKTTSNYERSVRINLPSGNGWVVKVTRLTPNMNNNRIADLMYIGAVTEVIDRKMRYPNTALLGIQFDASQFSNIPTISVLAKMRKIRVPDNYDPVTRTYSGIWSGGFKIAYSNNPAWVTYDIIIENRFSVGDKVGPQFVDKYELYKIAQYCDQQVPDGKGGTEHRYECNIYIATAAEAWQVLRDIASIYRGMIYWMQSQMTVRADMPRDTDYIFTNANVIDGTFTYSGSDERVKYTRALVSYDNPDNNFESDVTTTYDNALQRRYGDNVVELSAFGCTRESEAQRRGKWAIYTNNNDRTVAFKTGMEGEIPMIGHIVAVADDLISGVRIGGRISNVSADGKTITLDREVAAAKAGDRLLVNLPSGKAETRTVETVTGRDIKVSSVYSESPAKFLQWTLESDDITHQLFQIVSVKKADTDSIEYEFAGVSYNPSKFDFIDTGARIEDRPVSQIPVGGMEAPEEVLISQSVYVEQTMAITTMTIGWSAVKNSVAYEVEWRKDYGEWVKMPRTGQLSVDIKGVYTGQYLARVRAVSSAGVASIAKPSMLTDIVGKVGEPPSLAIFRTSSKAFSIYLDWSFGPNSEDALYTEIEYATNAQGTNPSFLGSYAYPTSDHLMMGLAAGVEFWFRARIRDRTGNVGAWTDWTYGVSSVDAEELLSYLEGQIGSGELAPGLLEEITNDVAAGIGDEIIGDVEDSILGFLTGDDENAPQDMLWYAGDDGTQESFVGNVTITSAYNDQDYSKAKQIFLLAGRVEDNKALISRVDAISVSRDEALAQSLSLISVEVGENTAKITSEQTARVTADEALAQDIQALAVTVGENTAAIATEQTVRADADTALAELVQTVSAQIGDIEAVVQQTSEAVVDLDGSIKANWQVKTEVNADGRVVQAGVGLGASIGADGTTRSEFLVMADTIGFLNSIDGQIHTPFVFDTVNDTAFLNSAIIGDATISYAKIANDLQSTNYQAGLVGWKLDKNGVFENNGSDSSGRMVQSNNRIDVYDASGALRVRIGKLI
Physico‐chemical
properties
protein length:1176 AA
molecular weight: 128297,41370 Da
isoelectric point:4,57306
aromaticity:0,08759
hydropathy:-0,23690

Domains

Domains [InterPro]
DC_0014
STR
1–1176
DC_0014
IPR053171
Unmapped
4–842
IPR053171 IPR015406
IPR055385
ATT
91–216
IPR055385 IPR032876 IPR013783
IPR036116
STR
638–708
IPR036116
QCW19520.1
1 1176
Architecture
STR
ATT
STR
ATT
STR
STR 1-90 | ATT 91-216 | STR 217-339 | ATT 340-500 | STR 501-1176
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCW19520.1
1 1176
Domain Start End Length (AA) Confidence
N-terminal 1 502 502 0,8993
Central domain 503 1121 620 0,0560
C-terminal 1122 1176 54 0,5960
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-502
Central
503-1121
C-terminal
1122-1176

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Va_90-11-287_p41_Ba35
[NCBI] 		2565521 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio anguillarum
[NCBI] 		55601 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW19520.1 [NCBI]
Genbank nucleotide accession
MK672800.1 [NCBI]
CDS location
range 25218 -> 28748
strand -
CDS
ATGAATAACGTTGTGATCTCAGGAAGTAAAGCGGGTGAGTCAGAGCAGCATACACCCGTAGAAGCGCCAAATGATTTGCGATCAGTCGCTACCGCCAGAATACTGCTGGCACTTGGCGAGGGTGAGTTTGAAGGTGGAGTGAATGAAAAAAGCATCTACTTAGATGGCACTCCATTAATGTCACAAAATGGCACAATAAACTTTCCCGGTGTTAAATGGGACTTTCGCTCAGGAACGGTTGACCAGCAATATATCCAAGGCTTTCCAGCGGTAGAATCAGAAACAGCGATCGGCGTTGAGTTAAAAAGCGATGCACCTTGGACGCGCTCATTTAACGATGGTCAAATCTCTGCAGTCATTATTCGCTTTCGCTGGCCTTCACTTCAAGAGCAGAAAGATAATGGTGATGTTGTTGGTTATTCGATTGACTACCGAGTTGAAGTGTCTACTGATGGCGGTCCTTATATTGTTGCATCCCAACAAGGTGTAACAGGAAAAACAACAAGCAATTACGAGAGAAGCGTCCGCATTAATTTACCAAGCGGTAACGGCTGGGTGGTGAAGGTTACGCGCTTAACGCCAAACATGAATAACAACCGTATTGCTGACCTTATGTACATTGGCGCGGTTACTGAAGTTATCGACCGTAAAATGCGCTACCCAAACACGGCGCTTTTAGGAATTCAGTTTGATGCAAGTCAATTTAGTAACATCCCGACGATCAGTGTTCTGGCTAAAATGCGCAAAATTCGGGTGCCAGATAATTACGATCCAGTAACAAGGACGTACAGTGGAATTTGGTCTGGCGGTTTTAAAATTGCTTACAGCAATAACCCTGCTTGGGTTACTTACGACATCATCATTGAAAACCGTTTCTCGGTTGGTGATAAAGTTGGTCCTCAGTTTGTTGATAAGTACGAACTGTATAAAATCGCTCAGTATTGCGATCAGCAAGTGCCGGACGGCAAAGGCGGCACAGAGCATCGCTACGAATGCAATATCTACATTGCGACCGCTGCCGAAGCTTGGCAGGTTCTACGTGATATAGCATCTATCTACCGAGGCATGATCTATTGGATGCAGAGCCAAATGACGGTTCGTGCAGATATGCCACGCGATACAGATTACATCTTCACTAACGCTAACGTTATTGATGGAACATTCACGTACTCAGGAAGTGACGAACGAGTTAAATACACTCGCGCACTTGTGAGCTACGACAACCCAGATAACAACTTTGAATCTGATGTAACCACAACTTACGACAACGCATTGCAGCGCCGCTACGGTGACAATGTTGTTGAGCTTTCAGCCTTTGGCTGCACTCGCGAATCCGAAGCGCAGCGCCGCGGTAAATGGGCTATTTATACCAACAATAACGACCGTACCGTTGCTTTTAAAACTGGCATGGAAGGCGAGATTCCGATGATCGGCCATATCGTGGCGGTCGCTGACGATCTTATCTCTGGCGTTAGAATTGGTGGCCGTATCTCTAATGTTTCGGCCGATGGAAAAACAATCACGCTTGATAGAGAAGTTGCGGCCGCTAAAGCTGGCGATCGTCTTCTGGTTAACTTACCAAGCGGCAAAGCGGAAACTAGAACGGTTGAAACGGTAACGGGTCGTGATATTAAGGTGTCCTCTGTTTACAGTGAATCACCGGCTAAGTTCTTGCAGTGGACATTAGAATCAGACGACATAACGCACCAACTGTTCCAAATTGTTTCAGTTAAAAAAGCAGATACTGACAGTATAGAATATGAGTTTGCAGGTGTTTCTTACAATCCAAGCAAGTTTGATTTCATCGATACTGGCGCAAGAATTGAAGATAGGCCAGTAAGCCAAATCCCAGTCGGCGGAATGGAAGCGCCGGAAGAGGTGTTAATCTCTCAGTCTGTTTACGTCGAGCAAACAATGGCAATCACCACCATGACGATAGGCTGGTCTGCTGTTAAGAATTCCGTAGCTTACGAAGTTGAGTGGAGAAAAGACTACGGCGAATGGGTGAAAATGCCGCGCACTGGTCAGTTAAGCGTGGATATTAAAGGCGTTTACACTGGCCAGTATTTGGCGAGAGTTCGCGCCGTTAGCTCGGCTGGTGTTGCTTCCATCGCTAAACCTTCAATGCTAACTGATATCGTCGGTAAGGTAGGAGAACCTCCATCACTAGCGATATTCAGAACCAGCAGCAAAGCCTTTTCTATCTATCTTGATTGGTCTTTTGGGCCTAATTCGGAAGATGCGCTTTACACTGAGATTGAATACGCAACCAACGCCCAAGGCACTAACCCTTCATTCTTGGGTAGCTACGCCTATCCAACAAGTGATCACTTGATGATGGGCCTAGCGGCTGGCGTTGAGTTCTGGTTTAGAGCAAGGATAAGAGACCGAACCGGAAACGTTGGCGCGTGGACAGATTGGACTTACGGAGTTTCATCCGTAGACGCCGAAGAGCTGCTAAGTTATCTAGAAGGTCAGATCGGCTCTGGTGAATTAGCACCCGGCTTGCTTGAAGAGATCACCAATGACGTTGCCGCTGGAATTGGCGATGAAATTATAGGTGATGTCGAAGATAGTATTTTAGGCTTCTTGACTGGCGATGACGAAAACGCACCTCAAGATATGCTTTGGTACGCTGGCGATGATGGCACTCAGGAATCATTTGTCGGTAATGTAACTATCACATCCGCTTACAATGACCAAGATTATTCAAAAGCCAAGCAGATATTTTTACTGGCTGGCAGGGTTGAGGATAACAAAGCCTTAATATCACGAGTGGATGCAATATCCGTATCGAGAGACGAAGCACTTGCTCAATCACTTAGTTTAATTTCGGTAGAAGTTGGTGAAAACACCGCCAAGATAACCTCAGAACAAACCGCAAGAGTTACAGCTGATGAAGCACTGGCGCAAGACATCCAAGCACTAGCGGTAACGGTTGGTGAAAATACAGCCGCAATCGCAACAGAGCAAACAGTAAGGGCAGACGCTGATACTGCATTAGCAGAGCTAGTTCAAACGGTATCAGCACAAATTGGCGATATTGAAGCGGTAGTGCAACAAACGTCAGAAGCCGTGGTCGATCTTGACGGTTCAATTAAAGCGAACTGGCAAGTTAAAACCGAAGTAAATGCAGACGGTCGAGTTGTTCAAGCCGGGGTTGGTTTGGGTGCGTCGATCGGAGCAGACGGAACAACGCGATCTGAGTTTTTGGTTATGGCCGACACAATTGGTTTTTTAAACTCAATCGACGGTCAGATACACACGCCATTCGTTTTTGATACCGTCAACGATACTGCATTTCTTAACTCAGCAATAATCGGAGACGCAACCATCAGCTATGCCAAAATAGCTAATGATTTGCAATCAACGAATTATCAAGCTGGTTTGGTTGGCTGGAAGCTTGATAAAAATGGTGTTTTTGAAAATAACGGCTCAGACTCGTCAGGAAGAATGGTTCAAAGCAACAACAGAATTGATGTTTATGATGCGTCTGGAGCACTAAGAGTCAGGATCGGTAAGTTAATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fdd48f0f45c084ae021d8f6b2b10e6e394af6ea6536684479382dfd2aedc1a8d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7673
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Large phenotypic and genetic diversity of prophages induced from the fish pathogen Vibrio anguillarum Andersen,N., Castillo,D., Kalatzis,P. and Middelboe,M. — — GenBank