Protein

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Genbank accession
YP_004301293.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
MVELDKYLPVNREEAFRNGVNKNFAKIEQGFSQRDAVMNSHQTTQKNAHDTEQILHYLSDKEKDVYYHSALDLKHYLLLECSRISNLVLGATTDQSVELKESRVDLEGKAHITLYGRLLADFTRLKNALDKLIELEESFDIPKIEPQFWTELGGIRNVVQQYFWINKLNGRVYQTQSDSQAQEGFYINELTPSGHFLGTMHIPKGGHGTSLGVEYVNGQMFMWTNVDKRLVKFTFKADTKLDATLLRDYMPSSVAPVFFAPVSDWKGEKMAFRRSDGIIELRDVNDLNKNIDKVYAQVTIPLEERENDYRPMQGVAISDKNCYWMSGWGTDENIGKVFVYDWHGKLLDTITLDNLTQVTGVGGEEYASDNHSEPEGLFFTEDKGKKVLFVGFSTGGTRKRHHKIYGFSQRGGLERYSSIVRNGAQNYPLTRGDGKAHSTPDGLTKLSDLTKVGSYYAQGSDVALLTDLPVEFKGVPLWIDNLPAEQHNDVRQVITRRSTEKSMLKFERMINIGKAEQAFSVGSWTVYQSQTTRGEFIDASIYQNKLSNITSPMKMYMTAEQANLFTDHPVKNGNAGWFYENSGYGVTGEFRQTITINSSLRYEVYSRMVFADRVSEWFVIAGNQVK
Physico‐chemical
properties
protein length:626 AA
molecular weight: 71254,33100 Da
isoelectric point:6,10197
aromaticity:0,11022
hydropathy:-0,51326

Domains

Domains [InterPro]
DC_0125
ATT
1–187
DC_0125 DC_1773
IPR048799
RBD
159–406
IPR048799 DC_1285
IPR048799
RBD
159–395
IPR048799
SSF101898
RBD
161–396
SSF101898
YP_004301293.1
1 626
Architecture
ATT
RBD
STR
ATT
ATT 1-187 | RBD 188-394 | STR 395-537 | ATT 538-626
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004301293.1
1 626
Domain Start End Length (AA) Confidence
N-terminal 1 205 205 0,7488
Central domain 206 405 201 0,7024
C-terminal 406 626 220 0,3467
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-205
Central
206-405
C-terminal
406-626

Taxonomy

  Name Taxonomy ID Lineage
Phage Brochothrix phage NF5
[NCBI] 		764561 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Brochothrix thermosphacta
[NCBI] 		2756 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004301293.1 [NCBI]
Genbank nucleotide accession
NC_015252 [NCBI]
CDS location
range 14204 -> 16084
strand +
CDS
ATGGTTGAATTAGATAAATATTTACCAGTCAATCGTGAGGAAGCGTTTCGTAATGGTGTAAATAAAAATTTTGCGAAAATAGAACAAGGATTTAGTCAACGCGATGCAGTGATGAATAGTCACCAAACAACACAAAAAAATGCACACGACACAGAGCAGATATTGCATTATTTAAGTGATAAAGAAAAAGATGTCTACTATCATTCAGCGTTAGACCTTAAACATTACTTGTTGTTGGAATGCTCACGTATCAGTAATCTTGTTTTAGGCGCTACTACAGACCAGTCTGTAGAATTAAAAGAGTCGCGTGTTGATTTAGAAGGAAAAGCACACATAACTTTGTATGGTCGATTACTTGCTGACTTTACAAGACTTAAGAATGCATTAGACAAATTAATCGAACTTGAAGAAAGTTTCGATATTCCAAAAATAGAACCGCAATTCTGGACGGAATTAGGCGGCATTAGAAATGTTGTACAGCAATATTTTTGGATAAATAAATTAAACGGTCGTGTTTATCAAACACAATCAGATAGTCAAGCACAGGAAGGGTTTTATATCAACGAATTAACTCCGTCTGGACATTTTTTAGGAACAATGCACATCCCTAAAGGTGGACATGGTACGTCATTAGGCGTTGAATATGTAAATGGACAAATGTTTATGTGGACTAATGTTGATAAAAGACTTGTTAAATTTACCTTTAAAGCTGATACGAAGTTAGATGCAACGCTATTAAGAGACTATATGCCTTCGTCTGTTGCGCCTGTGTTCTTTGCGCCTGTATCAGATTGGAAAGGTGAGAAGATGGCTTTCCGACGTTCAGACGGCATCATTGAATTGAGAGATGTAAACGATCTTAATAAGAATATCGATAAAGTATATGCACAAGTGACAATACCGCTAGAAGAACGTGAGAATGATTATAGACCAATGCAAGGCGTTGCGATAAGCGACAAAAACTGCTATTGGATGAGCGGATGGGGAACTGATGAAAACATCGGAAAAGTTTTTGTTTATGATTGGCATGGCAAACTTTTAGATACTATTACCCTTGATAATTTGACACAGGTTACTGGTGTGGGCGGCGAAGAATACGCATCAGATAACCATAGCGAACCCGAAGGACTTTTTTTCACTGAGGATAAAGGTAAAAAAGTTTTGTTCGTCGGTTTTTCTACCGGAGGAACTCGTAAACGACATCATAAAATTTACGGATTTTCTCAGCGTGGCGGACTTGAAAGGTATTCTAGTATCGTAAGAAACGGCGCTCAAAATTACCCTTTAACAAGAGGTGATGGAAAGGCCCATAGTACGCCTGACGGATTAACTAAATTGTCAGATTTAACAAAAGTTGGCTCTTATTATGCGCAAGGTTCTGATGTAGCGTTATTAACGGATTTGCCTGTTGAATTTAAAGGCGTGCCGTTATGGATAGACAATCTTCCTGCTGAACAGCACAACGATGTTAGACAAGTGATAACTAGACGTTCCACAGAAAAGTCAATGTTGAAGTTCGAACGAATGATTAACATCGGCAAGGCGGAACAAGCTTTTTCTGTAGGCTCTTGGACTGTTTACCAATCTCAAACAACAAGAGGTGAATTTATAGATGCATCTATTTACCAAAATAAATTAAGCAATATAACATCCCCGATGAAAATGTATATGACAGCAGAGCAAGCTAATTTGTTTACAGATCATCCTGTAAAAAATGGAAACGCAGGTTGGTTCTACGAAAATTCAGGTTATGGCGTTACAGGCGAATTTAGACAAACGATTACTATTAACTCATCTTTGAGATACGAAGTCTATTCTAGAATGGTGTTTGCAGACCGTGTGAGTGAATGGTTTGTTATTGCAGGTAATCAAGTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ac4e898eb64cf6210d01618677b0e7e5752f35a514273849612dbb3c1c34001
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7353
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of three heterogeneous Brochothrix thermosphacta bacteriophages Kilcher,S., Loessner,M.J. and Klumpp,J. 2010-10-15 — GenBank