Protein

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Genbank accession
AFC22509.1 [GenBank]
Protein name
tail fiber protein/ lysozyme
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MAENSGTIDSLLVSLGLETDAKSFQKGADAIKGVTDGMMQLAAAAGVGLGFKALTQGVASSYSELKRLSDITGFTIQQIRGLEFAMRRIGSANPVASGQKLAQLIPDIVRRFGQGQLNQDAYYSDKFKPSELVKISTTQGNDAATEYFLNAYGSMNATERAYMRSGVGISENDDIARLGEYGGKFFRESMNMSNAMTPEIDPKLAKVAQDFNDEMAKLARNFENLAYSMGSQLLPIVNKFLELVNGFIHENPEIASAMIGAAGVAGTVGALGFGKRILGLGGGGGSAAGGSGGMSWLSRLLVNPITAGAVSAFTPGNFFTSSEDARMMESPDAFLRKKWERENPGVPYNGQYGGVTPYQAYLKQKAGNIGDALNNPNARSYLDAISRAEGTSGYMNSGYHTMFGGGQIASLADHPRQLKDFQQTDGTWNKTSAAGRYQFTQKSWDEAAAALGLNDFSPQSQDMAALWLIQRAGQLDNVLNGDFMTATNNLGGVWASLPSSPYAQPKRSQAEMESYYTPDYVQRRSQAPYNSSVNRSESSKPVSITLNNTQNISGLGLNEQQVQDTVASALTTAGENLERSFNNNRW
Physico‐chemical
properties
protein length:586 AA
molecular weight: 62949,50220 Da
isoelectric point:5,56035
aromaticity:0,08874
hydropathy:-0,38242

Domains

Domains [InterPro]
DC_0145
STR
1–585
DC_0145
G3DSA:1.10.530.10
RBD
373–522
G3DSA:1.10.530.10
IPR023346
STR
374–518
IPR023346
cd00736
STR
376–516
cd00736
AFC22509.1
1 586
Architecture
STR
STR 1-585 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage ZF40
[NCBI] 		1127516 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum
[NCBI] 		554 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFC22509.1 [NCBI]
Genbank nucleotide accession
JQ177065.1 [NCBI]
CDS location
range 36100 -> 37860
strand +
CDS
ATGGCTGAAAATTCAGGAACAATCGATTCCCTGCTGGTTTCGCTGGGGCTGGAGACTGACGCTAAATCATTCCAGAAAGGCGCTGATGCTATCAAAGGCGTCACCGATGGGATGATGCAGCTTGCCGCCGCTGCTGGTGTAGGTTTGGGTTTTAAGGCGTTAACTCAAGGTGTCGCATCGTCATATAGCGAGCTAAAGCGTCTCTCTGATATTACAGGGTTTACGATCCAGCAGATTCGAGGGCTTGAGTTTGCCATGCGCCGCATTGGTTCAGCCAATCCAGTAGCATCGGGGCAGAAATTGGCGCAACTCATCCCCGATATTGTTCGCCGGTTCGGCCAGGGGCAACTAAATCAAGATGCGTATTATAGTGATAAATTTAAGCCATCAGAATTAGTCAAAATTTCAACAACTCAGGGTAATGATGCAGCTACCGAATATTTCCTGAATGCCTATGGGTCGATGAATGCGACAGAAAGAGCCTACATGCGATCGGGTGTTGGTATTTCAGAAAACGATGACATAGCCCGACTAGGTGAATATGGCGGTAAGTTCTTTCGCGAAAGTATGAATATGTCAAATGCCATGACTCCAGAAATAGATCCTAAGTTGGCTAAAGTTGCTCAGGATTTTAATGATGAAATGGCTAAGCTGGCGCGTAATTTTGAAAACCTAGCTTATTCAATGGGATCGCAATTACTCCCTATCGTTAATAAATTTTTAGAACTGGTAAACGGGTTTATTCATGAAAACCCTGAAATAGCCAGCGCAATGATCGGCGCTGCTGGTGTTGCAGGAACGGTTGGCGCGTTAGGATTTGGTAAAAGAATTTTGGGGTTAGGTGGCGGTGGTGGCAGCGCAGCCGGAGGATCAGGGGGGATGTCATGGTTAAGTCGATTGCTCGTTAACCCTATAACAGCGGGGGCTGTTTCGGCATTCACACCTGGTAACTTTTTCACGTCGTCAGAAGATGCTCGGATGATGGAAAGCCCCGATGCATTTCTGCGTAAAAAATGGGAGCGTGAAAATCCCGGCGTGCCATATAACGGGCAGTACGGCGGCGTGACACCTTATCAGGCATACCTGAAGCAAAAGGCCGGCAATATTGGCGATGCGCTAAATAACCCAAACGCCCGATCATATCTTGATGCGATATCCCGCGCAGAGGGTACAAGCGGGTATATGAATTCTGGTTATCACACCATGTTTGGCGGCGGGCAGATTGCCAGCCTGGCCGATCACCCGCGCCAGTTAAAAGACTTCCAGCAGACAGACGGGACGTGGAATAAAACATCGGCGGCAGGTCGTTATCAGTTCACCCAAAAATCATGGGATGAGGCGGCTGCTGCGCTGGGGCTAAACGACTTCTCTCCGCAGAGCCAAGACATGGCCGCATTATGGCTTATTCAGCGGGCGGGGCAGTTGGATAACGTATTGAACGGCGATTTCATGACGGCAACGAATAATCTCGGCGGCGTGTGGGCGTCACTGCCATCTTCGCCTTATGCGCAGCCGAAACGCAGCCAGGCTGAAATGGAGAGTTACTACACGCCTGACTACGTTCAACGCCGCAGTCAGGCTCCGTATAACTCATCTGTCAATCGTTCCGAATCATCAAAACCTGTCAGCATTACTCTAAATAACACTCAAAACATTTCCGGATTAGGTCTTAATGAGCAGCAAGTACAGGACACGGTGGCGAGCGCATTAACTACGGCCGGAGAAAACTTAGAGCGCTCATTTAACAATAATCGGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
459131e167697d1e249696bcc483da0f12d4a25e43074644d8197b1a9b6da6c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7479
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50