Protein

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Genbank accession
YP_010058955.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPPLKYVGPPIADNGDVVYRSYPGTAKQADPAEQAVRDRIAAGFVGYATQAYVEQRDALLATKAYADGRDALRIPLSRKGVTNGIPVLEASGRVSPSRIYVDSIDQPWVRGLWSPAAYNASSVVASSSEQQLYTCQVTDPGYPYRLVVFGSVDARCDVDTEWPVIRVRVGGPSGQIIGLGLGEANTMEKALWGDMFSRDDVDLGGDWLELYTEGHQGHYYTNGNELVWEFGGSSTEDLLALRSNGYDRHTGTNFQRIVATIGSRAGDSPGGGTPQHLRIYARVNDTATQYVCFQITHDTATCWYRNGGAEAQMPGSVGTSQSTNTPFTMVAGTPENPRTFYLYKGASLIMTVPDSTMATAIGPNNRGWGFGARAGSRLITQNGPPRITSVTVNDEVINHHTVGILPRRVDSMPVLTGPTTLHVSALRSAATGQVTVTPKRPALQVLAVPA
Physico‐chemical
properties
protein length:450 AA
molecular weight: 48383,60220 Da
isoelectric point:6,25578
aromaticity:0,08222
hydropathy:-0,27889

Domains

Domains [InterPro]
DC_2308
STR
6–153
DC_2308 IPR055681
IPR055681
STR
168–390
IPR055681 DC_1394
YP_010058955.1
1 450
Architecture
STR
STR
RBD
STR 6-153 | STR 168-397 | RBD 398-450
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010058955.1
1 450
Domain Start End Length (AA) Confidence
N-terminal 1 148 148 0,6936
Central domain 149 347 200 0,1602
C-terminal 348 450 102 0,9772
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-148
Central
149-347
C-terminal
348-450

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Pupper
[NCBI] 		2571249 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010058955.1 [NCBI]
Genbank nucleotide accession
NC_054723 [NCBI]
CDS location
range 121455 -> 122807
strand +
CDS
ATGCCTCCGCTGAAGTACGTCGGGCCGCCGATCGCCGACAACGGCGATGTGGTCTACCGCAGCTACCCCGGGACCGCCAAGCAGGCCGACCCGGCCGAGCAGGCGGTGCGCGACCGCATCGCCGCCGGGTTCGTCGGCTACGCCACCCAGGCCTACGTCGAGCAGCGTGATGCCCTGCTGGCCACCAAGGCCTACGCCGACGGCCGTGACGCGCTGCGCATCCCGCTCTCGCGCAAGGGTGTCACCAACGGCATCCCGGTCCTGGAGGCCTCGGGACGCGTCTCGCCCAGCCGGATCTATGTCGACAGCATCGACCAGCCGTGGGTGCGCGGATTGTGGTCCCCGGCCGCCTACAACGCGTCCTCGGTCGTCGCCTCGTCGAGCGAGCAGCAGCTCTACACCTGCCAGGTCACCGATCCCGGCTACCCGTATCGCCTGGTCGTCTTCGGCAGCGTCGACGCCCGCTGCGACGTCGACACCGAGTGGCCGGTCATCCGTGTGCGCGTCGGCGGGCCGTCGGGGCAGATCATCGGGCTCGGGCTCGGCGAGGCCAACACCATGGAGAAGGCCCTGTGGGGCGACATGTTCTCGCGCGACGACGTCGATCTCGGCGGCGACTGGCTGGAGCTGTACACCGAGGGGCACCAGGGGCACTACTACACCAACGGCAACGAGCTGGTGTGGGAGTTCGGCGGCAGCTCGACCGAGGACCTGCTCGCGCTGCGGTCCAACGGCTACGACCGGCACACCGGCACCAACTTCCAGCGCATCGTGGCCACGATCGGCTCGCGGGCGGGCGACAGTCCCGGCGGCGGCACCCCGCAGCATCTGCGGATCTACGCCCGGGTCAACGACACCGCGACCCAGTACGTCTGCTTCCAGATCACCCATGACACCGCGACCTGCTGGTACCGCAACGGCGGCGCGGAGGCCCAGATGCCGGGCTCGGTGGGTACCTCCCAGTCGACCAACACACCCTTCACGATGGTCGCCGGGACGCCGGAGAATCCGCGCACCTTCTACCTGTACAAGGGGGCGTCGCTGATCATGACCGTGCCGGACTCCACCATGGCCACCGCCATCGGGCCGAACAATCGAGGCTGGGGCTTCGGTGCTCGCGCCGGGTCGCGCCTGATCACTCAGAACGGCCCGCCGCGCATCACCTCGGTGACGGTCAACGACGAGGTCATCAACCACCACACCGTCGGCATCCTGCCGCGCCGGGTGGACTCGATGCCGGTGCTCACCGGACCCACCACCCTGCACGTCTCGGCGCTGCGCTCGGCGGCGACCGGCCAGGTGACCGTGACCCCCAAGCGCCCGGCTCTCCAGGTCTTGGCGGTGCCCGCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bdd8a09532b55673d93f71efd814f28835b0f98ab2837211cd98ba3785b7ceae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7772
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50