Protein

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Genbank accession
WAS28475.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNYTIPTDPEQIQAEIANLLATTPETTDRGRLFHLLNAAMANAGGGGGLPMSKEGVIGIHTTEPTGQTNLVSTMDFGAPYGWYQSTLNSPIVRPEGGNNRYYQLSPMITNDNNAYTLMVGAYEVQRDDHGTLFLRQFANSEEGDVLNQWSIDVGASPADRFAVCHGMYADYGALENVPYVVRLTYLTSSQLQLAVYRPAADGALVEVAASTTLNMSSTSSDVKRLRLAVCKAGQSDSIVINVQSSQTDKRTLALYNTTNGTVTHLIENEVNNGRDHIVAQSLYSYNPSAYGFVVSKLSGSTQTEYEVYSYDGTTATSQGTFTLSYTGVHTRGYLQIMACDFDLNGSGNYGYLMGSPHEHANNMVPYATWLPDSADVNKVTTHTLDLTAYADSDYHADSVTFLPDNDYYRPYEVFFIGLRHKTIPTLQLLRPTSKTPAGTLPLPQPASHFVLGYSLDDYIAISMLGNEGYVFNAAFEAWAWYQQFNNCTVDVEPQVKIPVVPNYLGAPLVHQPNAVTELPDQHRRLLTYLPKDGGVICLDADGTYTIPNDAPVGAAWTLTAKPSLFVQEANKLAAKHLGVLVAEFNDGTVANVCNLNSTGATVGNVALAIHIVKSADKAFTVTNLV
Physico‐chemical
properties
protein length:625 AA
molecular weight: 67927,12500 Da
isoelectric point:4,95610
aromaticity:0,09600
hydropathy:-0,16896

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WAS28475.1
1 625
Domain Start End Length (AA) Confidence
N-terminal 1 458 458 0,0654
Central domain 459 614 157 0,1429
C-terminal 615 625 10 0,9895
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-458
Central
459-614
C-terminal
615-625

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage LV6
[NCBI] 		3003704 No lineage information
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAS28475.1 [NCBI]
Genbank nucleotide accession
OP918262 [NCBI]
CDS location
range 22499 -> 24376
strand -
CDS
ATGAATTACACAATTCCTACAGATCCCGAGCAAATCCAAGCCGAGATCGCAAACCTACTAGCTACCACGCCAGAAACAACGGATCGCGGTCGCCTTTTCCACCTCCTTAACGCGGCTATGGCTAACGCGGGCGGCGGCGGTGGTCTTCCTATGTCTAAAGAGGGTGTGATCGGTATTCACACTACGGAGCCTACCGGACAGACTAACCTAGTCTCTACAATGGACTTTGGCGCACCGTACGGGTGGTATCAATCTACCCTTAACTCGCCTATCGTCCGCCCTGAGGGTGGTAACAACCGCTACTACCAACTAAGCCCAATGATCACCAACGATAACAACGCGTATACGCTTATGGTTGGTGCCTACGAGGTACAGCGCGACGATCACGGGACTCTATTCCTCCGTCAATTCGCTAACAGCGAGGAGGGCGACGTACTTAACCAGTGGTCTATTGACGTAGGTGCAAGTCCGGCGGATCGTTTTGCTGTATGTCATGGTATGTACGCCGACTACGGCGCACTAGAAAACGTACCTTACGTAGTACGCCTGACGTACCTTACTAGCTCACAATTGCAGCTAGCCGTTTACCGTCCGGCGGCAGACGGCGCGTTAGTAGAAGTGGCGGCGTCTACTACTCTTAACATGAGCTCTACGTCTAGCGACGTTAAACGTCTACGCCTAGCTGTGTGTAAGGCGGGTCAATCGGATAGTATTGTTATTAACGTGCAATCTAGCCAAACCGATAAACGCACCTTAGCCCTATACAACACCACTAACGGCACGGTTACCCACCTTATCGAAAACGAAGTAAATAACGGTCGTGATCATATCGTGGCGCAAAGCCTTTACTCGTACAACCCGTCGGCGTATGGTTTCGTAGTGTCTAAACTATCAGGCAGTACACAAACCGAGTACGAGGTATACTCTTACGATGGTACTACGGCTACGTCGCAGGGCACCTTTACCCTGTCTTATACGGGTGTGCATACTCGCGGTTACTTGCAAATTATGGCTTGTGACTTTGATCTAAACGGTAGCGGTAACTATGGTTACCTAATGGGTAGCCCACACGAGCACGCTAACAACATGGTACCTTATGCTACATGGCTACCTGATAGTGCCGACGTAAACAAGGTAACGACACATACCCTAGACCTAACCGCGTATGCGGACTCTGACTACCACGCGGATAGTGTTACATTCCTACCGGATAACGACTACTACCGCCCTTATGAAGTATTCTTTATTGGTCTACGCCATAAGACGATCCCGACGTTACAGTTACTACGCCCTACGTCTAAAACTCCGGCGGGTACCTTGCCGTTACCACAGCCCGCTAGCCATTTCGTACTAGGCTACAGTTTAGACGACTATATTGCGATCTCTATGCTAGGTAACGAGGGCTACGTATTTAACGCCGCTTTTGAGGCGTGGGCGTGGTACCAACAATTTAATAACTGTACGGTAGACGTAGAGCCACAGGTTAAAATTCCGGTGGTGCCTAACTATCTAGGCGCACCTTTGGTACACCAACCTAACGCGGTTACCGAGTTACCGGATCAACACCGCCGCTTACTAACATACCTACCGAAAGACGGCGGGGTAATTTGTCTAGACGCGGACGGTACCTACACGATCCCTAACGACGCCCCTGTAGGTGCGGCATGGACACTAACGGCAAAACCTAGCCTATTTGTACAGGAAGCTAACAAGCTAGCCGCTAAACACTTAGGCGTACTCGTGGCTGAGTTTAACGACGGCACCGTAGCTAACGTGTGTAACCTTAACAGTACAGGCGCTACCGTGGGTAACGTTGCCCTAGCGATCCATATCGTTAAGTCAGCGGACAAAGCCTTTACAGTAACTAACCTAGTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
246245f4eee0fef252a207824729a7078608076d0479fb505e5d2320beb736c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4524
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50