Protein

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UniProt accession
Q2NPA4 [UniProt]
Protein name
Glycine-rich domain-containing protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MQSINQPQKILVPFAQNDSAKVEIPVTTTSPGRFSQTLGSPPETALPPESGGTPPQLPDFNGAMNQQSRLAWWMMAGGRFAFDSTWANNTYVNGYPRGAVLPAAIGAGLIGMGEWYNNAEANTADPDVNGAGWVPGYHYGVTALTGQTGGTLTLSPALAAKRTLTIAGTLTSNLVVVLPAWVYTWRIVNNTGGAYTVTVKNAATTGVVIPQNGVSTTVHCDGTQVSFDSPNIPAAVLSTQPMQLGQATGRLLAVRRFAVAGATTYTPTTGTNTVIVEVVGAGASGAGTVAALSGQAAAGGGGGGGAYAKARIVSGFAGVTITVGAPGVSAAPGNAGQAGGASSFGSLVVCPGGAGGPQGQGSSSANYSAPGLGAAAPTFGGSADVIMAASGAAGSPGLLFSSSIVISGNGANTPYGSGGGGAGSSTAGQTGTGLSAGGQGSGGGGGYSTSGGSPGSGGSGGGGLVLVWEYA
Physico‐chemical
properties
protein length:471 AA
molecular weight: 45423,80270 Da
isoelectric point:6,71919
aromaticity:0,06794
hydropathy:0,10955

Domains

Domains [InterPro]
DC_1179
STR
1–435
DC_1179
IPR049304
STR
260–467
IPR049304
Q2NPA4
1 471
Architecture
STR
STR 1-467 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage OP2
[NCBI] 		331627 Uroviricota > Caudoviricetes > Kantovirinae > Tsukubavirus OP2 >
Host Xanthomonas oryzae
[NCBI] 		347 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAE72792.1 [NCBI]
Genbank nucleotide accession
AP008986 [NCBI]
CDS location
range 19369 -> 20784
strand -
CDS
ATGCAATCGATCAATCAGCCGCAAAAAATCCTCGTACCCTTCGCCCAAAACGATAGTGCGAAGGTCGAGATTCCGGTGACGACCACGAGTCCTGGGCGTTTTTCGCAGACCTTAGGTTCGCCGCCGGAGACTGCGCTGCCGCCCGAGTCCGGCGGCACCCCTCCTCAGCTGCCGGATTTTAACGGCGCGATGAATCAACAGTCGCGGCTGGCCTGGTGGATGATGGCCGGCGGTCGTTTTGCGTTTGACTCGACCTGGGCCAATAACACCTACGTCAACGGATATCCGCGTGGTGCGGTGCTGCCCGCGGCAATCGGTGCCGGTCTGATCGGCATGGGCGAGTGGTACAACAACGCCGAAGCTAACACGGCCGATCCGGACGTCAACGGCGCAGGTTGGGTGCCAGGCTATCACTACGGCGTGACGGCGCTGACGGGCCAGACCGGCGGCACGCTGACGCTATCTCCGGCGCTCGCCGCTAAGCGCACGCTCACAATCGCCGGCACGCTGACATCAAATCTCGTCGTTGTCCTGCCGGCCTGGGTCTACACCTGGCGCATCGTCAATAACACCGGTGGCGCGTATACCGTCACCGTGAAAAATGCGGCGACGACTGGGGTCGTCATCCCTCAAAACGGCGTGTCGACGACCGTACATTGCGACGGCACGCAGGTCTCGTTCGACTCGCCTAACATCCCGGCCGCGGTGCTGTCCACGCAGCCAATGCAGCTCGGTCAGGCGACAGGTCGTTTGTTGGCCGTGCGCCGGTTTGCCGTCGCTGGCGCGACGACCTACACACCGACAACCGGTACTAACACCGTGATCGTCGAGGTCGTGGGCGCAGGCGCGAGCGGGGCCGGTACCGTGGCCGCGTTGAGCGGGCAAGCCGCCGCAGGTGGCGGTGGCGGTGGCGGCGCCTACGCTAAGGCGCGCATCGTGTCGGGCTTTGCGGGCGTGACGATCACCGTCGGCGCGCCGGGCGTATCGGCTGCACCGGGCAACGCAGGTCAAGCCGGTGGCGCATCGAGCTTTGGCAGCTTGGTCGTGTGTCCGGGCGGCGCAGGCGGCCCACAAGGCCAGGGCAGTTCGTCGGCGAACTACTCCGCCCCCGGTCTGGGTGCCGCGGCGCCGACCTTTGGCGGTAGTGCCGACGTGATCATGGCCGCAAGCGGCGCGGCAGGCAGCCCAGGTCTATTGTTTAGCTCGAGCATCGTCATCAGCGGCAACGGTGCTAACACGCCCTACGGTTCGGGCGGTGGCGGCGCCGGGTCGAGCACGGCCGGTCAGACTGGTACGGGGTTGAGCGCCGGTGGTCAGGGTAGCGGCGGCGGCGGCGGTTACAGTACGTCGGGCGGTAGCCCTGGTAGCGGCGGATCCGGTGGTGGCGGCCTCGTACTCGTTTGGGAATACGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f2a33d41d70f670c1c852f9ffa2ce7bd2809f2c92efb58ad632620b74607cec9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8998
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50