Protein

View in Explore
Genbank accession
VVG93828.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,68
Protein sequence
MAVAYPTIPIPDLEDAETVLSDDFLVVNQTDGTRKAKIDDVVNDLSITKIVYFTEGGYLKSKKDFAYDPETKRYYTWNGDYPKIILPDSTVEGAGGVSANAWSVFGELAATSSGRIVDYGSIGGQLDIDLEVADTFKVRLTSNTTISFENQTEGLEGVARTITVCITQTSGGNKVYWPGNVKWSYGRDPILTFTAGATDIFKLETYDNGLTWYGALIIAGAI
Physico‐chemical
properties
protein length:222 AA
molecular weight: 24158,70990 Da
isoelectric point:4,38771
aromaticity:0,11261
hydropathy:-0,11892

Domains

Domains [InterPro]
DC_1864
STR
13–222
DC_1864
G3DSA:2.10.10.80
ATT
47–104
G3DSA:2.10.10.80
IPR040775
RBD
51–105
IPR040775
VVG93828.1
1 222
Architecture
STR
ATT
STR
STR 13-46 | ATT 47-104 | STR 105-222
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VVG93828.1
1 222
Domain Start End Length (AA) Confidence
N-terminal 1 207 207 0,7865
Central domain 208 211 5 0,0044
C-terminal 212 222 10 0,9649
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-207
Central
208-211
C-terminal
212-222

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage rV5_ev146
[NCBI] 		2695844 Uroviricota > Caudoviricetes > Vequintavirinae > Vequintavirus rV5ev146 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VVG93828.1 [NCBI]
Genbank nucleotide accession
LR699804.1 [NCBI]
CDS location
range 42855 -> 43523
strand -
CDS
ATGGCTGTAGCTTATCCTACAATACCAATTCCAGATCTTGAAGATGCAGAAACAGTCCTGAGTGATGACTTCTTGGTTGTCAACCAGACTGATGGGACAAGAAAGGCTAAGATTGACGATGTTGTCAACGATCTTAGCATTACTAAGATAGTCTATTTCACAGAGGGTGGTTATCTTAAGAGTAAGAAGGACTTTGCTTACGACCCCGAAACTAAGCGCTACTACACGTGGAACGGGGATTATCCTAAAATAATCCTCCCAGACTCCACTGTAGAGGGTGCTGGGGGTGTGTCTGCAAATGCCTGGTCTGTTTTTGGTGAGCTTGCTGCAACTTCTTCTGGCAGAATAGTTGATTACGGATCTATCGGTGGTCAGCTTGATATAGATCTTGAAGTTGCGGATACCTTTAAGGTTCGACTAACTTCAAATACCACAATCTCTTTTGAAAATCAAACAGAAGGTCTTGAAGGGGTGGCGAGAACTATAACCGTATGCATTACTCAGACCTCTGGCGGCAACAAAGTCTATTGGCCTGGTAATGTTAAATGGTCCTACGGAAGAGATCCTATCCTAACATTTACAGCTGGTGCAACAGATATTTTCAAGTTGGAAACCTACGACAACGGGTTAACTTGGTACGGGGCACTGATTATCGCAGGAGCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
584a26b569f5a919d61b6ac63e44fede9721cc501044192e818a78c011cea14b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9024
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50