Protein

View in Explore
Genbank accession
XNS40460.1 [GenBank]
Protein name
base plate tail tube protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYYSLMRESKVIVEYDGRAFHFDALSNYDIQTSYEEFKTLRRTVHRRTNYADSIINAQTPSSISLAVNFSNTLTEANFFEWLGFDRKGNTFLLPLYSINIEPIMFNIYIVNKDNNCVYFENCYVSTIDFSLDKNIPILNIGIESGKFSEVSTFTEAASIIQGEVMSYSPVIAYTNGSTLPGLISASLSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATISLYYLKRFAGDMVYNIEPETDVPLTIRNNNISIDFPSARITKRLDFSDVYRVEWDIIPTASSDPVRIDFFGETKND
Physico‐chemical
properties
protein length:300 AA
molecular weight: 34468,31920 Da
isoelectric point:4,84401
aromaticity:0,13667
hydropathy:-0,23167

Domains

Domains [InterPro]
IPR056389
ATT
1–298
IPR056389
XNS40460.1
1 300
Architecture
ATT
ATT 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNS40460.1
1 300
Domain Start End Length (AA) Confidence
N-terminal 1 287 287 0,6338
Central domain 288 289 3 0,8906
C-terminal 290 300 10 0,6592
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-287
Central
288-289
C-terminal
290-300

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage KookSpook
[NCBI] 		3233701 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNS40460.1 [NCBI]
Genbank nucleotide accession
PP925842 [NCBI]
CDS location
range 98180 -> 99082
strand -
CDS
ATGTACTACTCTCTAATGCGAGAGTCAAAAGTTATAGTTGAGTATGATGGTAGGGCATTTCATTTTGATGCCCTATCAAACTATGATATACAGACTTCCTACGAGGAATTCAAGACTCTTCGTAGGACTGTACATCGTAGAACTAACTATGCAGACTCTATTATAAATGCCCAAACTCCTTCCTCTATTTCACTAGCAGTAAATTTTAGTAATACTCTTACTGAAGCTAACTTTTTTGAGTGGTTAGGATTTGATAGGAAGGGCAATACTTTTTTATTACCATTATATAGTATTAATATTGAGCCTATTATGTTCAATATTTATATAGTGAATAAAGATAACAACTGCGTATACTTTGAAAACTGCTATGTATCTACGATAGATTTTTCTTTAGACAAAAATATACCAATTCTTAATATTGGTATTGAATCGGGGAAATTCTCTGAAGTATCCACATTCACAGAGGCAGCTTCTATTATACAAGGTGAAGTAATGTCTTATAGCCCAGTAATAGCATATACCAATGGCAGTACATTACCTGGTCTTATTTCTGCTTCTCTATCTTTCCAGCAGCAATGTTCCTGGAGAGAAGATAAGAGTGTTTTCGACATAAATAAAATTTATAATAATAAAAGAGCCTATGTAAACGAAATGAATGCTTCGGCAACCATTTCCCTATACTACTTAAAACGTTTTGCGGGAGATATGGTTTACAATATTGAACCGGAAACAGACGTACCTTTAACTATAAGAAATAATAATATTTCTATAGATTTTCCTTCAGCACGTATTACAAAACGCCTAGATTTCTCAGATGTGTATAGAGTTGAGTGGGATATTATACCTACTGCTTCTTCGGACCCAGTGAGAATAGATTTCTTTGGAGAAACTAAAAATGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
32f14013cc2d6db69cd48ecf39c4625146a7bd8e3e809e88619142e201861fc5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8108
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50