Protein

Genbank accession
APD17843.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
TF
Evidence Phold
Probability 1,00
Protein sequence
MANWSNITPENSNEKDDEFIIRHQGINYLQKRDVVAASMSNARWLAEGNYLAGSEVKGSDNIWYTAVVNTGSDYGNSTNPVTKVDDSVWVQKVYEVTPLNDDWNGFFTRNHITQLPSPAGVPATSGSGGTVYGADDEWSIGNFTTGGVISLDNDGLVFSQGIYKLFTFTVEQLSLIDVTKVPVYIVGQDGSRHFVKHNGTGVVVTKPNTTTLKVQVNNAILAELGITKVFSFFVTATVGFVQEKGDLALPSSLGFFEIEGLPQENGFIITNMTLGGKRVIIQNVTFGPITNGGSATVPWITPFPNAVFNCVASPLGLGANAASSSMATGNPTVNGVNVYNWGTIQAKVRIFAIGY
Physico‐chemical
properties
protein length:355 AA
molecular weight: 38095,26370 Da
isoelectric point:5,01260
aromaticity:0,10423
hydropathy:-0,01775

Domains

Domains [InterPro]
G3DSA:2.60.40.3940
262–355
G3DSA:2.60.40.3940
APD17843.1
1 355
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JSF4
[NCBI] 		1916110 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD17843.1 [NCBI]
Genbank nucleotide accession
KY065147 [NCBI]
CDS location
range 38588 -> 39655
strand +
CDS
ATGGCAAACTGGTCAAATATTACACCAGAGAATAGTAATGAAAAAGATGATGAGTTTATTATTCGTCACCAAGGTATCAACTACTTACAGAAACGAGATGTAGTTGCTGCTAGTATGAGCAATGCACGTTGGCTTGCTGAAGGTAACTATTTAGCTGGAAGTGAAGTAAAGGGTAGTGATAATATTTGGTATACTGCGGTCGTAAACACAGGTAGTGATTACGGGAACAGTACCAACCCTGTAACTAAGGTTGATGATTCGGTATGGGTACAAAAAGTGTATGAAGTCACCCCCCTAAACGATGACTGGAACGGTTTCTTCACAAGAAACCACATAACTCAACTACCATCACCTGCAGGAGTACCAGCTACCAGTGGTTCTGGGGGTACTGTATATGGTGCTGATGACGAGTGGTCTATTGGAAACTTCACCACAGGTGGGGTTATTTCGCTTGATAATGATGGTCTTGTATTTTCTCAAGGAATCTACAAACTATTCACGTTCACTGTTGAGCAGTTGTCCCTTATTGATGTCACCAAAGTTCCGGTCTATATCGTTGGTCAAGATGGTTCGCGGCACTTTGTTAAACACAACGGAACGGGTGTGGTTGTCACAAAGCCAAATACCACAACTCTAAAAGTGCAGGTTAACAATGCAATTCTTGCCGAGCTTGGTATTACGAAAGTGTTTAGTTTTTTTGTGACTGCTACGGTTGGTTTCGTTCAAGAAAAAGGTGATCTTGCTCTACCGTCTTCGCTTGGATTTTTTGAGATCGAGGGTCTTCCTCAAGAAAACGGCTTTATCATCACAAATATGACTCTTGGGGGGAAGAGGGTAATCATACAAAACGTAACCTTCGGACCAATTACCAATGGGGGTAGTGCAACTGTACCATGGATTACCCCGTTCCCTAATGCGGTTTTCAACTGCGTAGCTTCACCACTAGGTCTGGGAGCAAACGCGGCCTCTTCGTCGATGGCCACAGGTAACCCTACTGTTAATGGAGTTAACGTATACAACTGGGGTACAATACAAGCTAAAGTAAGAATATTTGCGATAGGTTATTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
cd51cb39673b731daafdf85684dee88353d2210103b74a5049fdc50d370b3a3a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6491
Evidence 0,6491
Download PDB

Literature

Title Authors Date PMID Source
Environmental bacteriophages active on biofilms and planktonic forms of toxigenic Vibrio cholerae: Potential relevance in cholera epidemiology Naser,I.B., Hoque,M.M., Abdullah,A., Bari,S.M.N., Ghosh,A.N. and Faruque,S.M. 2017 28700707 GenBank