Protein

View in Explore
Genbank accession
UYD59856.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,68
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADLKVGTTIGGSTAWHQGNLPLVPSGVKILYKGNRIYSEADKPTANELNVVSRDGDTMTQRLTIATTNDYPLAFNSTDSGPSKILFQRAGTTRLVMGMDTAGNFQLSANDAAGAHFGYGLQIWNSSLDAAFGGSIQMPTDKGWHIGKGGQAVLRDHNNGNVSLAALPNASGGSGDLYLGYNGTGMVTNTVRLESAMTWKSVRTLVNNDGYILRSAMDNPYFSQSEADNRYIRRNVNAVTDSYLLTKSVDYSAGSDGIPAGYSGFFRNNSSNGFMGLTMHVAHPGYANGAYARGLTFNYGGSNTVYTYAFDSAGNKQANIKIYTEADKPTPNEIGALAENANAVSASKLATGRRISLSGGASGSVVFDGSSDVTLPVTVANDSHTHSNYVKKTGDTMTGNLIVNAAISANELKAGSDTHKARIVHSGGAVWYQGGSTATDQPNNVTMSGYSGTNLDLFQMRMTDGRSPVVRWGSTDYRIYHEGNRPSELVSISLSGKSCNSAVESGTYSIFSGTTDTPFGTGPSGSTMQVSKWGDGGVQQMFFSYSADRVFVRRMEGGVWKSWFELYSTSKKPSASDVGALPVNGNAVSATRLQTARLISGVPFDGTSNITISANNVGAYSKSETDDLIKDSGKKTVVINKPAGITADFYVPVMLAGLRNHEDVYISTKSSGGSDPMNNCSFNGVVRSGGWSDQNSYVTGQFSIYQTNERALHSVYGGTEADGVVAFYVHEKAFPVSVVVDGSVGVTAGASQQHGTTIFTASANPSTGNTKATLLAQWADGNGFYQGSSRTPSFQTMDTELDKKLSLSGGIMTGPIRWDAANEYINAAGNSVYIAAKAGRIYLEGSATPMARIGSVDHEIYHTGNKPSAGDVGAYTKGETGNLLNGKLNLSGGTMSGSISMSGQARLDLPGGHITSYGKADVLSVNGKTYSFVTSSMDAHLCQNSYYDGVWKKYDNTRSSMLAVAQNESFTIRYSEPGATNPIGAALMSLTKAGVTFSSGVNAAGRGQFNDIITNNGWIRTTGATGWFSETYGGGWHMSDSTWIRSYGGKKIHIANPDANAIDTTGGITAAKGLNLGGGASVASLDVRGGYASLTSAGNTLLEFHSPGVSAVLMYKDAPGNFRLGKSNGSGGMSATWLTIDTAGTLTAHNNMNVGGALMEGGQRVYSPRNPQPGMSAAQVGAALAALPMDAVGQYAMMYLAVNQGGWLGPGTVRPGSHLRYSTAEGREPAGNIPPGNWRLHGRTNEGGNWGPWQTSVWQRVS
Physico‐chemical
properties
protein length:1262 AA
molecular weight: 132763,56080 Da
isoelectric point:8,25074
aromaticity:0,08796
hydropathy:-0,31482

Domains

Domains [InterPro]
DC_1903
ATT
1–475
DC_1903 DC_0940 DC_1924
cd19958
STR
500–567
cd19958 DC_1142
UYD59856.1
1 1262
Architecture
ATT
STR
RBD
ATT 1-475 | STR 476-911 | RBD 1044-1262
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYD59856.1
1 1262
Domain Start End Length (AA) Confidence
N-terminal 1 610 610 0,0935
Central domain 611 809 200 0,6200
C-terminal 810 1262 452 0,7487
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-610
Central
611-809
C-terminal
810-1262

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM9-HANS
[NCBI] 		3101604 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD59856.1 [NCBI]
Genbank nucleotide accession
OP380603.1 [NCBI]
CDS location
range 50952 -> 54740
strand -
CDS
ATGGCAGATCTGAAGGTAGGAACTACTATAGGTGGTTCAACCGCCTGGCACCAAGGTAATCTGCCATTGGTTCCGAGCGGTGTTAAAATTCTTTATAAAGGCAATCGAATTTATTCTGAAGCAGATAAACCAACTGCTAACGAATTAAATGTTGTTAGTCGTGATGGCGACACAATGACCCAACGATTGACTATCGCTACAACAAACGATTATCCGCTGGCTTTTAATTCAACTGATTCTGGCCCTTCAAAAATCCTTTTCCAACGTGCTGGTACAACCCGCCTGGTAATGGGCATGGACACGGCTGGTAATTTCCAATTATCTGCAAATGATGCTGCTGGTGCTCACTTCGGATATGGATTGCAAATCTGGAATTCTTCACTTGATGCCGCGTTCGGCGGAAGTATTCAAATGCCAACAGACAAGGGCTGGCACATTGGAAAAGGCGGTCAAGCTGTTTTGCGTGACCATAATAATGGAAATGTTTCATTAGCTGCTTTGCCAAATGCGTCAGGCGGTTCTGGCGATCTTTATCTTGGCTATAACGGCACAGGTATGGTTACAAATACCGTTCGCCTTGAATCAGCCATGACCTGGAAAAGCGTTCGCACTCTGGTCAACAACGATGGCTATATCCTTCGTTCCGCTATGGATAATCCGTATTTCAGTCAATCTGAAGCAGACAATCGCTATATTCGACGCAATGTCAACGCCGTAACTGATAGCTATTTGCTGACTAAATCAGTTGATTACAGCGCGGGATCCGACGGTATTCCGGCCGGTTACTCTGGTTTCTTTAGAAACAATAGTTCAAATGGATTCATGGGTTTGACCATGCACGTAGCGCATCCCGGCTATGCCAATGGTGCGTATGCCCGCGGATTAACGTTTAACTATGGTGGAAGCAATACAGTTTATACGTACGCCTTCGATAGCGCTGGCAATAAGCAAGCAAACATTAAAATCTACACTGAAGCCGACAAACCAACCCCGAATGAAATCGGAGCTTTAGCCGAAAATGCTAATGCTGTTTCAGCGTCAAAACTTGCTACTGGCCGGCGTATAAGCCTTAGCGGCGGTGCATCAGGTTCTGTTGTGTTTGACGGTTCAAGCGATGTTACGCTTCCCGTGACCGTAGCAAATGACAGTCACACCCACAGCAATTACGTCAAAAAAACCGGCGATACAATGACCGGTAACCTGATTGTTAATGCTGCCATATCTGCAAATGAGTTAAAGGCAGGTTCGGATACTCATAAAGCGCGTATTGTTCACTCAGGTGGTGCAGTATGGTATCAAGGTGGGTCCACAGCAACCGACCAACCAAACAACGTCACAATGTCAGGTTATTCTGGGACAAACCTTGATCTGTTCCAAATGCGCATGACTGATGGTCGTTCACCGGTTGTACGTTGGGGCTCAACTGATTATCGCATATATCACGAAGGAAATCGCCCATCTGAGTTGGTTTCTATAAGCTTGTCTGGTAAATCCTGTAACAGCGCCGTTGAATCTGGTACTTACTCGATCTTCAGCGGAACAACCGATACACCGTTTGGCACCGGGCCATCAGGCTCAACAATGCAAGTTTCGAAATGGGGCGATGGCGGTGTTCAACAAATGTTCTTCTCTTACAGTGCCGATCGTGTATTCGTTCGACGCATGGAAGGTGGTGTATGGAAAAGCTGGTTTGAGCTTTATTCAACTTCAAAGAAACCGAGTGCTTCTGATGTTGGTGCCTTGCCGGTTAACGGAAATGCTGTGTCTGCAACTCGTTTGCAAACTGCACGTTTGATTTCAGGTGTTCCATTCGATGGCACCTCGAATATCACGATTTCGGCTAACAACGTCGGAGCTTATTCAAAATCTGAAACTGATGATTTGATTAAGGATTCCGGAAAGAAAACAGTTGTGATCAATAAACCAGCCGGCATTACCGCTGATTTTTACGTTCCAGTAATGCTTGCTGGACTTCGAAATCATGAAGATGTGTACATCAGCACCAAATCGTCTGGTGGCAGTGACCCGATGAACAATTGTTCATTTAATGGGGTTGTTCGTTCTGGCGGCTGGTCTGATCAAAATAGTTATGTGACAGGCCAATTTTCAATTTACCAGACAAATGAGCGCGCTCTACACTCTGTTTATGGTGGAACTGAAGCTGATGGAGTTGTTGCTTTTTATGTCCACGAAAAGGCGTTCCCTGTTAGTGTTGTTGTCGACGGTTCAGTCGGCGTCACTGCCGGTGCATCACAACAACATGGGACAACTATTTTCACAGCATCTGCTAATCCGTCGACAGGGAATACGAAAGCGACATTACTTGCGCAATGGGCTGATGGCAACGGATTCTACCAAGGATCTTCACGCACTCCGTCATTCCAGACTATGGACACCGAACTGGACAAGAAATTGAGCCTTTCTGGCGGAATTATGACTGGCCCAATTCGATGGGACGCAGCTAACGAGTATATTAATGCTGCTGGCAATAGCGTGTATATTGCTGCTAAAGCCGGTCGTATATATCTTGAAGGCTCAGCAACGCCAATGGCTAGAATTGGAAGCGTTGATCATGAAATTTACCATACCGGTAATAAACCGTCGGCAGGTGATGTTGGAGCCTATACCAAAGGTGAAACGGGCAATTTGCTTAACGGTAAATTGAACCTTTCTGGCGGAACAATGAGTGGCAGCATCTCAATGAGCGGTCAAGCCCGTTTGGATCTGCCTGGCGGCCATATTACGTCATATGGCAAAGCTGATGTTCTTTCGGTTAATGGAAAGACCTATTCGTTTGTTACCTCGTCGATGGATGCCCATCTTTGCCAAAACTCATATTACGACGGTGTATGGAAGAAATACGATAACACTCGCTCGTCTATGCTAGCCGTTGCGCAGAATGAGTCGTTTACAATACGGTATTCTGAACCAGGCGCTACTAACCCTATCGGCGCCGCGCTTATGTCTCTTACAAAAGCCGGTGTCACATTCAGTAGCGGGGTTAATGCAGCCGGTCGGGGTCAATTCAATGACATTATTACAAATAATGGTTGGATTCGCACAACCGGTGCAACTGGCTGGTTTAGTGAAACGTACGGCGGCGGCTGGCATATGTCTGATTCAACATGGATCAGGTCATATGGCGGAAAGAAAATCCACATCGCAAACCCTGACGCAAATGCCATTGATACAACTGGCGGTATTACCGCCGCCAAAGGTCTAAATCTCGGTGGTGGCGCTTCTGTTGCTAGTTTGGATGTCCGCGGTGGTTATGCTTCGTTGACAAGTGCTGGTAATACGCTACTGGAATTCCACAGCCCGGGTGTTAGCGCTGTATTGATGTACAAAGATGCACCTGGAAATTTTAGACTTGGTAAGTCTAATGGCTCAGGCGGTATGTCGGCAACATGGCTGACTATCGACACTGCTGGAACATTAACAGCTCATAATAATATGAACGTCGGCGGCGCATTAATGGAAGGCGGTCAACGTGTTTATTCACCCCGAAACCCACAGCCAGGTATGTCTGCCGCGCAAGTTGGAGCAGCATTAGCCGCACTGCCGATGGATGCGGTTGGCCAATACGCTATGATGTACTTAGCCGTTAACCAAGGCGGCTGGTTGGGTCCAGGCACCGTCCGTCCAGGATCCCATTTGCGGTATTCTACAGCTGAAGGTCGCGAACCCGCAGGCAATATTCCTCCTGGGAACTGGCGCTTGCACGGTCGTACCAATGAAGGTGGAAACTGGGGCCCATGGCAAACATCCGTATGGCAGCGTGTTTCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c1ffd2660b9c6a24fd8632283dd567dbd46a89d907de573e93383d345a2aab00
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5116
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank