Protein

View in Explore
Genbank accession
XYR96016.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,67
Protein sequence
MGLSLRGQTSGAVDINAPAVAGDNTITLPDGNGSANQFYKNSTTAGIVTHSSMVEDSSGNVGINTITFPANGTNLKVSDGTISRLGLDKTGANARSFTIGNSGTILNVYDETADAERLRITSTGGVGVNTTTVSAGVNVAVGGTIRVQDSTDATQYLTINHQGIDFQNTGAGSSDTASAHLLDDYEQGTWTATLATGGNGVNSGSTRYVKLGRKVTVWGRISGLDTPAAANVTIRLPFAASQGVGDTPEAVGTAMINNVNLDNGASKTYLVTYVGGNDMTFYQCGDNVGWDPLQGTEMTASGSIIFTLNYYTEA
Physico‐chemical
properties
protein length:314 AA
molecular weight: 32305,99580 Da
isoelectric point:4,54095
aromaticity:0,06369
hydropathy:-0,17229

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR96016.1
1 314
Domain Start End Length (AA) Confidence
N-terminal 1 13 13 0,8012
Central domain 14 212 200 0,0580
C-terminal 213 314 101 0,9990
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-13
Central
14-212
C-terminal
213-314

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage RB11-B
[NCBI] 		3412546 Viruses >
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR96016.1 [NCBI]
Genbank nucleotide accession
PV261925.1 [NCBI]
CDS location
range 183255 -> 184199
strand -
CDS
ATGGGACTGAGTTTACGAGGACAAACTTCTGGAGCCGTTGATATCAACGCTCCAGCTGTAGCTGGTGATAATACTATCACACTACCTGATGGGAATGGTAGTGCCAATCAGTTCTATAAGAACAGTACCACAGCTGGTATTGTAACTCATTCCTCAATGGTTGAGGATAGTAGTGGTAATGTTGGTATCAATACGATAACTTTTCCTGCTAATGGAACAAACCTCAAAGTAAGTGATGGAACGATATCCAGATTAGGATTGGATAAAACTGGTGCTAATGCTCGTTCCTTTACTATAGGAAATAGTGGTACAATTTTAAATGTTTATGATGAAACTGCAGACGCAGAAAGACTTCGTATAACTTCAACTGGTGGTGTAGGTGTCAATACCACCACAGTTTCTGCAGGTGTTAATGTTGCTGTTGGTGGTACAATCAGAGTACAAGACTCTACAGATGCAACACAGTATCTGACTATTAACCATCAAGGTATTGATTTTCAGAATACTGGTGCTGGTAGTTCTGATACAGCATCTGCACACCTTTTAGATGATTATGAGCAAGGTACTTGGACTGCTACACTCGCTACGGGTGGTAATGGCGTTAATAGTGGTAGCACTAGATATGTAAAACTCGGAAGAAAAGTTACTGTATGGGGAAGAATTTCTGGATTAGACACCCCAGCTGCAGCCAATGTAACTATTAGACTTCCATTTGCAGCATCTCAAGGAGTTGGTGACACTCCTGAAGCTGTGGGTACCGCGATGATTAATAATGTAAATCTTGATAATGGAGCAAGTAAGACGTATCTTGTAACTTATGTTGGCGGTAATGACATGACATTTTATCAGTGTGGGGACAATGTGGGTTGGGATCCATTGCAAGGAACAGAGATGACTGCTAGTGGCTCTATCATTTTTACACTTAATTATTATACAGAAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3635c9ca9858e0008a9912bee17e4aa086964dde08903ceb361e6ebd1ba26f39
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6961
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50