Protein

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Genbank accession
YP_004934610.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,59
Protein sequence
MTTFTRFKLRNGTAAEWTAANPTLLQGEIGVETDTRKYKIGDGSTAWAGLSYYIDGVAIRGQCSKMTDGTIDITTQGTYVTTGLTATLDSSTAYGMVLGTDDAFGLKNDSGGTKLFRIYGSIDATDGNNSTLGVKLAKNGVAIDNSECRAFTGSGAQEAKLVTSWMVELDDGDEVSLLIANHSNTTDITLKRGRVIAVEVRA
Physico‐chemical
properties
protein length:202 AA
molecular weight: 21398,63260 Da
isoelectric point:4,90426
aromaticity:0,06931
hydropathy:-0,18762

Domains

Domains [InterPro]
DC_0529
STR
3–198
DC_0529
G3DSA:2.10.10.30
ATT
4–47
G3DSA:2.10.10.30
SSF69349
STR
6–119
SSF69349
IPR041352
ATT
8–45
IPR041352
YP_004934610.1
1 202
Architecture
ATT
STR
ATT 3-47 | STR 48-198 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004934610.1
1 202
Domain Start End Length (AA) Confidence
N-terminal 1 42 42 0,8640
Central domain 43 191 150 0,0023
C-terminal 192 202 10 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-42
Central
43-191
C-terminal
192-202

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CBS1
[NCBI] 		909297 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CB0201
[NCBI] 		232352 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004934610.1 [NCBI]
Genbank nucleotide accession
NC_016164.1 [NCBI]
CDS location
range 9485 -> 10093
strand +
CDS
GTGACCACTTTCACACGTTTCAAGCTGCGTAACGGTACGGCTGCTGAATGGACTGCGGCTAACCCGACGCTGCTGCAGGGCGAGATCGGGGTGGAGACGGACACGAGGAAGTACAAGATCGGGGATGGCAGCACCGCCTGGGCTGGCCTGAGTTACTACATCGACGGCGTTGCGATCCGCGGGCAGTGCTCGAAGATGACCGATGGCACGATCGACATCACGACGCAGGGCACCTACGTCACCACCGGCCTGACTGCCACGCTGGATAGCAGCACTGCCTATGGCATGGTGCTTGGCACTGATGACGCCTTCGGGCTGAAGAACGACAGCGGCGGCACCAAGCTATTCAGGATCTACGGCAGCATTGACGCTACAGACGGCAACAACAGCACACTGGGCGTGAAGCTGGCCAAGAATGGCGTGGCGATTGACAACAGCGAGTGCCGAGCATTCACCGGCAGCGGTGCTCAGGAGGCCAAGCTGGTGACCTCCTGGATGGTCGAGCTGGATGATGGCGACGAGGTGTCGCTGCTGATCGCCAACCACAGCAACACCACAGACATCACACTCAAGCGTGGCCGGGTGATCGCTGTTGAGGTTCGTGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
acc29630196dd59fc7f5afea93cf9269a25a1843594030a683537614148f10d7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8733
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50