Protein

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Genbank accession
QMS41869.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGCGDVLSLNDLQVAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGADDADKAVLWPIEDGGDGNYYVWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFTNGETVNFRGKVLTIDCKAKFIGDGALIFTNMASGSIIEKPFMESATTPWVIYPWTEDGKWITDAQAVAATLKQSKTEGYQPGVNDWVKFPGLEALIPQNVKDQHVASTLDIRECVGIEVRSAGGLMAAYLFRNCHHCKVIDSDTIIGGKEGIITFENLSGEWGIGNYAIGGRVHYGSGSGVQFLRNNGGASHNGGVIGVTSWRAGESGFKTWQGSVGAGTARNYNLQFRDSVALSPVWDGFDLGSDPGMAPEDDRPGDLPVSQYPMHQLPNNHMVDNILVMNSLGVGLGMDGRDGYVSNVTVQDCAGAGILAHTFNRTFSNITAIDCNYMNFDSDQIIIIGDCIVNGIRAAGIKPQPSKGMVISAPNSTLSGVVGNVPPDRILAGNIIDSALGQTRINGFNGDSVEMGLRVHKLTKTLDSGAIRSTLNGGPGSGSAWTEITAISGSLPDAVSLKINRGDYHAVEIPVAVTVLPDAAVRDNGSIALYLEGDSLKALVKRANGSYTRLTLA
Physico‐chemical
properties
protein length:684 AA
molecular weight: 72364,47260 Da
isoelectric point:5,08660
aromaticity:0,07749
hydropathy:-0,09064

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
69–128
G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
93–132
IPR040775 IPR011050
IPR015331
RBD
138–684
IPR015331
QMS41869.1
1 684
Architecture
ATT
STR
ATT 69-128 | STR 129-684
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QMS41869.1
1 684
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9946
Central domain 156 599 445 0,9858
C-terminal 600 684 84 0,8840
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-599
C-terminal
600-684

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage S55
[NCBI] 		2759178 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella pullorum
[NCBI] 		605 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMS41869.1 [NCBI]
Genbank nucleotide accession
MT653137.1 [NCBI]
CDS location
range 39627 -> 41681
strand -
CDS
ATGTCTAGTGGTTGCGGCGATGTATTGTCACTTAACGATTTACAGGTAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGCAAACAGGGTGGTGTAGCAGGTGGCGCAGATATCGACTACGCCACTAACCAGGTAACCGGGCAGACGCAGAAGACCCTGCCTGCTGTTTTACGCGATGCTGGTTTCTCCCCGGCGTCTTTCAACTTCACAACCGGCGGGACCCTGGGAGCTGACGACGCGGATAAAGCGGTTCTTTGGCCTATTGAGGACGGCGGAGACGGTAACTATTACGTATGGCGCGGGTCACTCCCTAAAGTTATCCCTGCGGCGTCGACACCTCTTACGACGGGCGGCATTTCGGATTCCGCTTGGGTCGCGTTCGGGGATATCACCTTCCGTGCCGAAGCGGATAAGAAATTTAAATACTCCGTTAAACTGTCTGACTTCACTACTCTACAGCAACTAGCCGATGCCGCTGTTGACAGCGTTCTTATCGACCGCGATTACACCTTTACCAATGGTGAAACTGTTAACTTCAGAGGGAAAGTCTTAACCATTGACTGTAAAGCTAAGTTTATTGGTGATGGGGCTTTGATTTTCACTAATATGGCTAGTGGTTCTATAATAGAAAAGCCTTTCATGGAGAGCGCTACGACCCCGTGGGTTATTTACCCCTGGACAGAAGATGGGAAGTGGATTACAGATGCACAAGCTGTCGCTGCTACACTTAAACAATCTAAGACTGAGGGGTATCAACCGGGAGTTAATGATTGGGTCAAGTTCCCTGGTCTTGAGGCATTGATACCACAGAATGTAAAAGACCAGCATGTAGCGTCCACGCTGGATATCCGTGAGTGTGTAGGTATTGAGGTCAGAAGTGCTGGTGGACTTATGGCTGCTTACTTGTTCCGCAACTGTCATCATTGTAAGGTGATTGATTCTGACACCATCATTGGTGGTAAAGAAGGCATCATCACCTTTGAAAACTTAAGTGGTGAGTGGGGCATCGGCAACTATGCCATAGGTGGCCGTGTGCATTATGGCTCAGGTAGTGGTGTGCAGTTCCTTCGAAACAACGGAGGTGCGTCGCACAATGGTGGGGTTATTGGTGTGACGTCATGGCGTGCGGGTGAGTCTGGGTTTAAAACATGGCAAGGCTCTGTAGGTGCCGGTACAGCTCGCAACTATAACCTTCAGTTCCGTGACTCAGTTGCATTATCTCCAGTGTGGGACGGCTTTGACTTAGGCTCAGACCCGGGAATGGCGCCGGAAGACGATAGACCGGGAGATTTACCGGTATCTCAATATCCTATGCATCAGCTACCTAATAACCACATGGTTGATAACATCCTTGTTATGAACTCATTAGGTGTAGGTTTAGGCATGGATGGTCGTGATGGTTATGTGTCGAATGTTACCGTGCAGGATTGTGCAGGCGCTGGTATACTTGCCCATACATTCAACCGTACCTTCTCTAACATTACGGCGATTGACTGCAACTATATGAACTTTGATTCAGACCAGATAATCATCATTGGTGACTGTATTGTAAATGGCATCCGAGCCGCAGGCATTAAGCCTCAGCCATCCAAAGGTATGGTCATCAGCGCACCTAACTCGACCCTAAGTGGTGTTGTAGGTAACGTGCCACCAGACCGTATTCTTGCTGGTAACATTATTGACTCTGCGTTAGGACAGACAAGGATTAATGGGTTTAATGGTGACTCGGTGGAAATGGGTTTAAGAGTCCACAAGCTTACCAAAACCTTGGATAGTGGTGCTATTCGCTCTACGCTGAATGGGGGCCCCGGTTCTGGTTCCGCTTGGACTGAAATTACGGCTATATCTGGGTCATTACCGGATGCAGTATCGCTAAAAATTAACCGCGGCGACTATCACGCGGTAGAAATACCAGTAGCCGTTACCGTGCTACCCGATGCTGCCGTTAGAGATAATGGCAGCATCGCACTGTACCTAGAAGGCGATAGTCTTAAAGCGTTAGTTAAGCGCGCAAATGGTAGCTACACAAGATTAACTTTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2e4c81bdc9f56a7c19bbdfac1a0cce41277277586dcece980bbb89db52014170
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6911
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50