Protein
View in Explore- Genbank accession
- CAH1085286.1 [GenBank]
- Protein name
- transporter
- RBP type
-
TSP
- Protein sequence
-
MSNEEKSGLKHWVPAFVLMVCVVLAFFDKISIAVLFSDPHFQSSMGIAEDKAKLGWLMTSFLLAYGFSSVFLSFLGDIFNPKKMLFWSVTSWGLLMLCMGFTTSYSGMLILRVLLGLAEGPLFALAYTIVKQTYTDRQQARASTMFLLGTPIGAFLGFPITAAVLAHQDWHTTFFVMAALTLIAILSIVFGLRNLQLKKTVELEGESKRTNFKGHIANTKVLVSNSAFWLVCLFNIALMTYLWGLNSWVPSYLMQDKGFNLKEFGVYSSFPFIAMLIGEVVGAFLSDKLGRRAIQVFSGLLLAGIFMYVMVIMTEPLLIIAAMSLSAMAWGFGVAAVFALLARVTTSNVGATAGGIFNGLGNFASAIAPVLIGYIVMQTHSFNLGITFLAAVAVIGSLFLVPLLKRY
- Physico‐chemical
properties -
protein length: 407 AA molecular weight: 44518,52820 Da isoelectric point: 9,34761 aromaticity: 0,13514 hydropathy: 0,83243
Domains
Domains [InterPro]
IPR036259
STR
5–406
STR
5–406
IPR036259
STR
9–201
STR
9–201
IPR050382
Unmapped
12–401
Unmapped
12–401
cd17319
STR
12–403
STR
12–403
IPR020846
STR
14–407
STR
14–407
IPR011701
STR
18–369
STR
18–369
cd17319
STR
20–403
STR
20–403
IPR005829
Unmapped
282–299
Unmapped
282–299
1
407
Architecture
STR 5-407
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
407
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 10 | 10 | 0,0273 |
| Central domain | 11 | 202 | 193 | 0,3384 |
| C-terminal | 203 | 407 | 204 | 0,1596 |
Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain|N-terminal too short, forced to 10 residues
Sequence started with non-N-terminal domain|N-terminal too short, forced to 10 residues
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-10
1-10
Central
11-202
11-202
C-terminal
203-407
203-407
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage MD-2021a [NCBI] |
2899278 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAH1085286.1
[NCBI]
Genbank nucleotide accession
CAKLQH020000010
[NCBI]
CDS location
range 60584 -> 61807
strand -
strand -
CDS
ATGAGTAATGAAGAAAAAAGTGGATTAAAGCATTGGGTACCTGCTTTTGTCCTTATGGTGTGTGTAGTACTGGCATTTTTCGACAAGATCAGTATTGCGGTTTTATTTTCAGACCCACATTTTCAAAGCTCGATGGGAATTGCTGAAGATAAAGCCAAGCTCGGATGGCTCATGACAAGTTTTTTACTTGCTTATGGTTTTTCATCAGTCTTCCTAAGCTTTTTAGGCGACATTTTTAACCCAAAGAAAATGCTGTTCTGGAGTGTGACCTCTTGGGGCTTACTCATGCTTTGCATGGGCTTCACCACCAGTTATTCAGGTATGTTGATTTTACGGGTTCTACTCGGTTTGGCAGAAGGTCCGCTATTTGCTTTGGCATACACCATTGTTAAGCAGACTTATACAGACCGTCAGCAGGCACGTGCCTCAACCATGTTCTTACTGGGTACACCGATTGGTGCATTCCTTGGGTTCCCAATTACGGCAGCCGTTCTGGCACACCAAGACTGGCACACCACTTTTTTTGTGATGGCTGCACTAACACTCATTGCAATTTTAAGCATTGTTTTTGGTCTGCGTAACTTGCAACTCAAGAAAACTGTTGAGCTTGAAGGTGAAAGTAAACGTACTAACTTCAAAGGCCATATCGCCAATACCAAAGTACTTGTGAGCAATAGCGCGTTCTGGTTGGTGTGCTTATTCAATATTGCCTTAATGACTTATTTGTGGGGCCTAAACAGTTGGGTTCCTTCTTATCTCATGCAAGACAAAGGATTCAACCTCAAAGAGTTTGGGGTGTATTCAAGCTTTCCATTCATTGCCATGTTAATTGGCGAAGTGGTTGGTGCGTTTTTATCTGACAAATTAGGCCGCCGCGCAATTCAAGTATTCAGCGGTTTATTACTCGCGGGCATCTTCATGTATGTGATGGTCATTATGACTGAGCCATTATTGATTATTGCTGCCATGTCTTTAAGTGCTATGGCGTGGGGCTTTGGAGTGGCTGCGGTATTTGCTTTGCTTGCCCGAGTAACCACCTCAAATGTAGGTGCAACTGCGGGTGGAATATTTAATGGTTTAGGCAATTTTGCAAGTGCAATTGCACCTGTACTGATCGGTTACATCGTGATGCAAACACATAGTTTTAATTTGGGAATTACCTTCTTGGCTGCAGTCGCTGTCATTGGGTCGCTGTTCTTAGTTCCTCTTTTAAAACGTTATTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
47b9ad678465f75e0e7e0de43b8f8d3eb6d2418f056c94980b86202c1629b16a
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50