Protein

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Genbank accession
BDA97043.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALERQEVKNPTGIVTDIAPADLPLDKWSFGNNVRFKNGKAQKALGHTPIFDTAQAPILDMFPFIRNNIPYWLLCGEQRMYLADGTTVVDVSPGGYSASVTNRWSVGSFNGVIFANDGVNPPHHLPPTESVFRVLPNFPANTTFRRLKSFKNFLIGLNVTSNSIEMPQMVWWSTSADAGGIPASWDPTDPTKDAGQNTLADTNGAIVDGVKLRDSFIIYKEDSVYSMRYIGGLFIFQFQQLFNDVGILGPNCAIEFDGNHFVVGHGDVYVHNGVQKQSVIDAQVRKFFFSDINPDNYQRTFVIADHVNTEMWVCYSSTRSEPGKHCDRAIIWNWKENTWSIRDLPNVLSGAYGIIDPKVSNLWDDDPNPWDTDTSVWVEGSYNPAKSSMIFSSFQDKKLFLFGNNSTFSGQNFVSTLERSDIYLGDDRMMKTVSAIIPHITGNGTCNIWVGNAQVQGSGIRWKGPYPYRIGQDYKIDTKHVGRYIALKFDFSSEGDWYFNGYTIEMAPKAGMR
Physico‐chemical
properties
protein length:513 AA
molecular weight: 57567,08550 Da
isoelectric point:5,71268
aromaticity:0,12865
hydropathy:-0,31248

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BDA97043.1
1 513
Domain Start End Length (AA) Confidence
N-terminal 1 373 373 0,7574
Central domain 374 502 130 0,0899
C-terminal 503 513 10 0,9956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-373
Central
374-502
C-terminal
503-513

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaS-HSN4
[NCBI] 		2872297 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDA97043.1 [NCBI]
Genbank nucleotide accession
LC648443 [NCBI]
CDS location
range 33185 -> 34726
strand -
CDS
ATGGCCCTAGAGAGACAAGAGGTCAAGAACCCAACGGGTATCGTGACTGATATTGCACCCGCTGACCTGCCCCTGGATAAATGGTCCTTCGGGAACAACGTCCGGTTTAAGAACGGCAAGGCTCAGAAGGCTCTGGGCCATACGCCTATCTTTGATACAGCCCAGGCCCCAATCTTGGATATGTTCCCTTTCATCCGGAATAACATCCCCTATTGGCTCCTGTGTGGCGAACAGCGTATGTACTTGGCGGATGGTACTACCGTTGTGGATGTATCCCCAGGTGGATACTCTGCGAGTGTAACCAACCGGTGGTCTGTAGGTTCCTTCAATGGAGTTATCTTTGCTAACGATGGGGTTAACCCTCCCCACCACCTACCACCAACTGAGAGCGTGTTTAGGGTTCTACCTAACTTCCCAGCGAACACAACCTTTAGACGTCTGAAGTCCTTCAAGAACTTCTTGATTGGCTTGAACGTAACGTCTAACTCTATCGAAATGCCACAGATGGTCTGGTGGAGTACCTCGGCTGATGCTGGGGGTATTCCTGCATCTTGGGACCCAACGGATCCTACTAAGGATGCTGGTCAGAACACCTTGGCTGATACCAATGGTGCCATCGTAGATGGTGTTAAGCTTCGTGACTCCTTCATCATCTACAAGGAAGACTCTGTATACTCCATGCGGTATATCGGTGGACTGTTCATCTTCCAGTTCCAGCAGCTGTTTAACGACGTAGGTATCCTCGGACCCAACTGTGCAATAGAGTTCGATGGTAACCACTTTGTAGTAGGCCACGGTGACGTATATGTCCACAACGGTGTGCAGAAGCAGTCTGTTATTGATGCTCAGGTCCGTAAGTTCTTCTTCTCGGATATTAACCCTGACAACTATCAACGGACCTTCGTAATTGCAGACCACGTGAATACTGAAATGTGGGTATGTTACTCTTCTACTAGGTCTGAGCCAGGTAAGCACTGCGACAGGGCTATCATCTGGAACTGGAAGGAAAACACTTGGAGTATCCGAGACCTTCCCAACGTCCTCAGTGGAGCCTACGGGATCATCGATCCTAAGGTGTCTAACCTCTGGGATGACGACCCCAACCCCTGGGATACTGATACTTCGGTCTGGGTTGAAGGCTCTTATAACCCAGCAAAGTCCAGTATGATCTTCTCGTCTTTCCAGGATAAGAAGTTGTTCCTCTTTGGTAATAACTCTACATTCTCTGGACAGAACTTCGTCAGTACCCTTGAGAGATCCGATATCTATCTCGGGGATGATCGAATGATGAAGACAGTGAGTGCCATCATTCCACACATTACTGGTAACGGTACTTGTAACATCTGGGTGGGTAACGCTCAGGTACAAGGTTCTGGTATTCGATGGAAAGGCCCTTACCCATACCGGATTGGTCAGGACTATAAGATTGACACTAAACATGTGGGCCGATATATAGCCTTGAAGTTCGACTTCTCTTCGGAGGGGGATTGGTACTTCAATGGGTACACTATTGAAATGGCCCCGAAGGCAGGTATGCGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5b2e551fa3afb43fc7e2466d658471be5ad1d2650ce2d9e11040e43b03899e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8897
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome analysis of vB_PaS-HSN4, a novel Pseudomonas aeruginosa phage Rafiey,S. and Bouzari,M. 2015-08-24 — GenBank