Protein

Genbank accession
YP_009948741.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARPFEGALNDLLQGVSQQVPRERVAGQCSAQVNMLSDPVTGIRRRPGSLFVSVHDFGPIGEGDALYTQYLERGADGRHLVINTNTGGWWLLDREAKTVVNEGNLSYLLAADRRSIQTTSMGGITYILNTEKRPSATTDNSDKKDPKTTGFYFVKSGAFSKEYDLSVVWSLGSQTVTYTTPDGTTAGDADQSVPEAIARKLVEELIAVGVDFAVRVGPYIYFELITGTDLKITSTSGSPYVGYSNQSQVNLETDLPARLHPSADGALCAVGQSERALVWYRYDADKGVWLESGDYNSVTAISVDVPYKIVDDDVEQHIMEGRLAGDDLTNPAPTFLEERRITGIGTFQGRLVLLSGAYVCMSATGEPDRFFRSTVSSLDPTDRIDIASGSAQNSVFRQALQFNKDLILLGDSTQAVVPSLQQLLAPDNASVVLTSDLACNAFVAPVTTSQTLMYPAPRSEAFSAVLELVPSQFTSSQYVSQDVTTHIPRYIEGEARFMQSASAANIVLMATTGDNRQVIAHEYHFTSQGKVHQAWHKWVFPYRVASLHFARDRIVLFAADDTGSTDQITISTIDPKQGGVTFDVDRLPHLDLMSITPITDGKGIVPIHLRPWVAEGKLTGSVATGTLASEEVAIDVDEITWEFTVEPGFKGSELYLGFRYESLFAPTPPMLKDQNDTLISTAPVRLLRYELTTRNTGEFDVRIVDPTIGLDYSDSTTSLLFGTDDVELGQALVSDLARVPVPCRSNAQSTEMYLSTDGTQDMNILEIEYIIRYNQRRRRV
Physico‐chemical
properties
protein length:780 AA
molecular weight: 85562,91790 Da
isoelectric point:4,78069
aromaticity:0,08462
hydropathy:-0,18756

Domains

Domains [InterPro]
IPR058003
9–780
IPR058003
YP_009948741.1
1 780
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaS_OWB
[NCBI] 		2419783 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009948741.1 [NCBI]
Genbank nucleotide accession
NC_048167 [NCBI]
CDS location
range 24182 -> 26524
strand +
CDS
ATGGCTCGACCATTTGAGGGTGCATTGAATGACCTGCTGCAAGGTGTTTCTCAGCAAGTTCCACGTGAACGTGTAGCTGGCCAATGCTCTGCGCAAGTTAACATGCTGTCCGACCCAGTAACAGGTATCCGCCGTCGTCCCGGTAGCCTGTTCGTGAGTGTGCACGATTTCGGCCCGATTGGTGAGGGTGACGCGCTGTACACGCAGTATCTCGAACGAGGTGCTGATGGACGACACTTAGTCATCAACACCAATACAGGTGGTTGGTGGCTCTTAGACCGCGAGGCTAAGACTGTTGTGAACGAGGGCAACTTATCATACCTCTTAGCAGCAGACCGCCGCAGTATCCAAACTACCAGTATGGGTGGTATCACGTACATCTTGAATACTGAGAAACGTCCGTCAGCAACGACTGACAATTCTGACAAGAAAGACCCGAAAACTACGGGCTTCTACTTCGTTAAGAGTGGTGCGTTCAGTAAAGAGTACGACTTATCGGTGGTGTGGTCACTTGGTAGCCAAACCGTGACATACACTACACCAGACGGTACAACAGCAGGTGATGCAGACCAATCTGTGCCAGAGGCGATTGCACGTAAACTCGTGGAAGAACTCATTGCAGTTGGTGTTGACTTCGCTGTGCGCGTTGGCCCGTATATCTATTTTGAATTAATCACTGGTACTGACCTTAAAATCACCAGTACGTCAGGCTCACCGTACGTTGGATACTCAAACCAATCTCAGGTGAACCTAGAGACTGACCTCCCTGCGCGTCTGCATCCGTCTGCTGATGGTGCGTTATGTGCTGTAGGTCAATCTGAACGTGCGCTTGTGTGGTATCGCTATGATGCCGACAAGGGTGTGTGGTTGGAATCGGGGGACTACAACTCTGTAACCGCTATTAGTGTGGATGTGCCCTATAAAATTGTCGATGACGATGTGGAGCAGCACATTATGGAGGGACGCTTGGCTGGTGATGACCTCACTAACCCTGCGCCTACATTCCTAGAGGAACGTCGTATCACTGGTATCGGCACATTCCAAGGTCGCCTAGTACTGCTATCGGGTGCATACGTCTGTATGAGTGCAACAGGTGAGCCTGACCGTTTCTTCCGGTCTACAGTGAGTTCACTTGACCCAACAGACCGTATTGACATTGCATCCGGTTCTGCACAGAACTCTGTGTTCCGTCAAGCGTTACAGTTCAACAAGGACTTGATTCTACTCGGAGACAGTACTCAAGCGGTAGTACCATCACTGCAACAGCTACTAGCCCCAGATAATGCTAGTGTGGTACTTACATCGGATTTAGCCTGTAATGCGTTTGTAGCACCTGTTACAACCTCGCAGACCTTGATGTACCCTGCACCGCGTAGTGAAGCATTCAGTGCTGTTCTGGAGCTTGTACCGTCACAGTTTACATCATCTCAGTATGTGTCACAGGATGTCACCACGCATATCCCACGTTATATCGAGGGTGAGGCACGTTTCATGCAAAGTGCAAGTGCTGCTAACATCGTGCTTATGGCAACAACAGGCGATAACCGTCAGGTAATAGCCCATGAGTACCATTTCACGAGTCAAGGTAAAGTTCACCAAGCCTGGCACAAGTGGGTGTTCCCATATCGTGTGGCTAGTCTACACTTTGCACGTGACCGTATTGTGTTGTTCGCTGCTGACGATACTGGTAGCACAGACCAAATCACCATCTCAACCATCGACCCTAAACAGGGTGGCGTGACATTTGATGTTGACCGACTACCTCACCTAGACCTGATGAGCATCACGCCTATCACCGACGGTAAAGGTATCGTGCCAATCCATCTACGTCCTTGGGTGGCTGAGGGTAAATTAACAGGCTCTGTGGCAACAGGTACATTAGCATCTGAGGAAGTGGCAATTGATGTGGATGAGATTACGTGGGAGTTCACGGTGGAGCCGGGCTTTAAGGGTTCAGAGCTTTACTTGGGTTTCCGTTACGAATCTCTGTTTGCACCTACGCCACCTATGTTGAAAGACCAGAACGACACCCTAATCAGTACAGCCCCGGTTCGACTGCTGCGTTATGAGTTAACTACCCGTAATACAGGTGAGTTCGATGTTCGTATCGTTGACCCTACTATCGGGCTGGATTACTCAGATAGTACAACCAGTTTGCTATTTGGTACAGATGATGTTGAGTTAGGTCAAGCCTTAGTGTCTGACTTAGCACGTGTCCCAGTACCATGCCGTAGTAATGCTCAATCCACTGAGATGTACTTGAGTACTGACGGTACGCAGGATATGAACATTCTGGAAATTGAATACATCATTCGTTACAACCAACGCCGTCGTCGCGTATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4eed6d48ec4ad52da0b5402308312b8e486038a322a6ee80137b1a6dbed5020f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2482
Evidence 0,2482
Download PDB

Literature

Title Authors Date PMID Source
Identification of the first tail tubular proteins receptor that mediate phage adsorption to Vibrio parahaemolyticus Zhang,H. 2020-01 — GenBank