Protein

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Genbank accession
YP_011992357.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MEGGERNNLELYAGASVPLDDWANFTRYNWYNDMSISGAVRSGSDKIKCHRLRVYSPSIDGADFDFYPTGYHKARAFNAGTVGNIHGWGIEQYDSGNGIPFNSVSTTNNNASFSPVVAGGTSTPNGYNIRFAIGMLSPGAAGWSRTILKLLGDNDKHRGFEFNVDGSLGTWANAPGDMWGVGYDFAKNPTSDRDLKKEIIYTDGKESYDRVMQWLPTMFKYKWGDTQRYGLIAQDLAKIDLQYVKIVPGSPVFEDVIGVDTDGNEYVDRQIETDRADDTLALDSNVILTDMACAMVYMGNKMNTLEQELEQLKQVVAALTPV
Physico‐chemical
properties
protein length:322 AA
molecular weight: 35635,29520 Da
isoelectric point:4,74972
aromaticity:0,11180
hydropathy:-0,42174

Domains

Domains [InterPro]
DC_0195
STR
3–322
DC_0195
IPR030392
CHP
191–239
IPR030392 Coil
IPR030392
CHP
191–309
IPR030392
YP_011992357.1
1 322
Architecture
STR
STR 3-322
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_011992357.1
1 322
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0038
Central domain 11 205 196 0,2038
C-terminal 206 322 116 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-205
C-terminal
206-322

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage IrmaTschudi
[NCBI] 		2851992 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus irmatschudi
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011992357.1 [NCBI]
Genbank nucleotide accession
NC_105115.1 [NCBI]
CDS location
range 23094 -> 24062
strand +
CDS
ATGGAAGGAGGTGAGCGAAACAATCTTGAGCTTTATGCCGGGGCTAGTGTTCCTTTGGATGATTGGGCTAACTTTACTAGGTATAACTGGTATAATGATATGTCAATATCCGGTGCTGTTAGATCTGGTTCAGACAAGATTAAATGTCATCGTTTAAGAGTTTATAGTCCTAGTATTGATGGGGCGGACTTTGATTTCTATCCAACAGGCTACCATAAAGCGCGTGCATTTAATGCTGGCACTGTGGGTAACATTCATGGTTGGGGTATTGAGCAGTACGATAGTGGTAATGGAATTCCATTCAATTCAGTGAGTACAACTAACAATAACGCATCATTCAGTCCGGTAGTCGCGGGAGGCACTTCAACTCCAAACGGTTATAACATACGTTTCGCAATTGGTATGTTGTCCCCGGGCGCCGCTGGATGGTCCAGGACAATACTCAAGCTGCTAGGTGATAACGATAAACATAGAGGATTTGAATTTAACGTAGATGGTAGTTTAGGAACATGGGCAAACGCGCCCGGGGATATGTGGGGAGTTGGTTATGATTTTGCAAAAAACCCAACTTCAGACCGTGACTTAAAGAAAGAAATTATTTACACAGATGGAAAGGAAAGTTATGACCGTGTTATGCAGTGGTTGCCTACTATGTTTAAATATAAGTGGGGCGATACTCAACGTTATGGTCTTATAGCCCAGGATCTTGCAAAAATAGATCTTCAATATGTAAAAATCGTACCTGGCTCTCCAGTTTTTGAAGACGTAATTGGAGTTGACACGGATGGTAACGAATATGTGGATCGTCAAATTGAAACCGATAGAGCTGATGACACACTTGCTCTTGATAGTAACGTTATTCTAACGGATATGGCTTGTGCTATGGTGTACATGGGTAATAAAATGAATACTTTAGAACAAGAGTTAGAACAACTCAAACAAGTTGTAGCTGCCTTAACTCCAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
efe072cca578db6a7daaa676ead7bce1f18b8bd613555d87d7dca84eb8e15157
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6691
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank