Protein

View in Explore
Genbank accession
YP_010646195.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MQIWIHDRSMRKVCALNNEIPGMLPYTNSQWHLYIEYSTSTFDFTIPKFVNGKLHDDLKHINDQMYVSFYYDNSYHVFYVSQLVENDFSFQVTCNNTNLELAAEIERPLASVDGAKTLEWYLQTLDLLGFAGLEVGFNEISDRTRTITFESQNGTKLEQLHSLMNQFDAEFVFRTDLNRDGTLKKFVIDIYHRPDENHHGIGKVRGDVTLYYQTGLKGVQVTSDKTQLFNAGYFVGKDGLTLESVVFEEKNELGQVEFYSFKDSPMVYAPLSAEKYPSSIGGANEPDRWTRRDFQTEYSDVDSLKAYALRTIKQYAYPLMTYTVSVQSSFIENYKDINLGDTVKIIDNNFIGGLALEARVSEMIISFDNPTNNSVVFTNFRKLDNKPSSELQQRIDEIVSKSLPYKIEIRTTNGTVFKNGIGRSTVKPILKQGDKIVNATYRFVIDGTIKYSGMTYDMVASEINQPTTLTISAWVDNKEVASEEVTFVNVSDGKQGPKGDRGNDGLPGKDGVGLKSTTVTYGMSDSDTIMPTSWTANPPTLIKGKYLWTKTQWTYTDSTSATGYQKTYIAKDGNNGNDGLPGKDGVGIRNTTITYAQGTSGTVAPTNGWSTQVPNVPAGQYLWTKTVWDYTDNTSETGYSVAKMGEQGPKGDRGNDGKTTYFHTAWSYSADGTDRFSTVYPNLNLLVNSSAKTKDGFFKDFDKVENGYGEVTMTGTNTWVARNMWDGFSIKPRDYKPGDKYTMSMDVMITSWNLPAGTHLDEFWIGQRYSHGGGLHSWKRICAIDLPKDPSKMLNQWIKITQTSTIPPYEDPAINTEAIFMTKFTGPSEGSFTIRIRKPKQEPGETATPYMPSASEATTADYPSFIGHYTNYTPVDSPNPRDYTWSLIRGNDGKDGANGGENLIVNSAFPENIDGWGFWDASTPNNNLHIDTHGFYYNGTKPLFRLDNNTNGVVPASTKRFPVKRNTDYSFNIQTFATGDIKGLDIYFLGRKANETDKELTKVIHLKTHTGSPSTTQTVKWHLIFNSGDCDEGFIRINNNGTTDGKTSTLFFAELDCYEGTTDRAWQESSKDLEKQIDTKADDVLTQAQLNRLNETNSIIKAELNAKASLDTLNQWVEAYQNFVNANNANRAQAEKDLADASARVTKLENDLNDMSERWNFIDSYMAASNEGLVVGKKDKSSSIMFNPNGRISMFSAGNEVMYISKGVIHIENGIFSKTIQIGRYREEQDLLNPDRNVIRYVGGA
Physico‐chemical
properties
protein length:1245 AA
molecular weight: 139714,86950 Da
isoelectric point:5,36528
aromaticity:0,11165
hydropathy:-0,57398

Domains

Domains [InterPro]
DC_0002
STR
1–607
DC_0002 IPR054563 DC_0002
IPR010572
ENZ
142–382
IPR010572 DC_1328 Coil
YP_010646195.1
1 1245
Architecture
STR
STR 1-1245
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC928
[NCBI] 		2365049 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010646195.1 [NCBI]
Genbank nucleotide accession
NC_070680.1 [NCBI]
CDS location
range 15191 -> 18928
strand +
CDS
ATGCAAATTTGGATTCATGACAGAAGCATGCGCAAAGTGTGCGCATTGAATAATGAAATTCCAGGAATGTTGCCATATACGAACAGTCAATGGCATTTATATATTGAATACTCAACAAGTACGTTTGACTTCACAATTCCTAAGTTTGTAAATGGCAAGCTACACGATGATTTAAAACACATCAATGACCAAATGTATGTGTCGTTTTATTATGATAATTCCTACCACGTTTTCTATGTATCGCAACTCGTTGAAAATGATTTTAGTTTTCAAGTGACTTGTAACAATACCAACTTGGAACTAGCAGCAGAAATAGAACGTCCGTTAGCTAGTGTTGACGGTGCTAAAACACTTGAGTGGTATCTTCAAACCCTTGATTTACTTGGTTTTGCTGGCCTTGAAGTTGGTTTCAATGAGATTTCTGATAGGACAAGAACTATCACGTTTGAATCACAAAATGGTACAAAACTAGAACAGCTTCATAGCTTGATGAATCAATTCGATGCAGAGTTTGTTTTCCGTACAGATTTAAACCGAGATGGTACTTTGAAAAAATTTGTCATTGACATTTACCACCGGCCTGACGAAAACCATCACGGCATTGGAAAGGTTCGAGGGGATGTAACTCTTTACTATCAAACAGGTTTGAAAGGCGTTCAAGTTACTAGTGATAAAACGCAACTATTTAACGCTGGATATTTTGTTGGAAAAGACGGACTAACGCTAGAAAGCGTTGTGTTTGAGGAAAAGAATGAGTTAGGACAAGTAGAGTTCTACTCATTTAAAGACAGTCCGATGGTTTACGCACCTTTATCAGCAGAAAAATATCCATCGTCAATTGGCGGTGCTAATGAACCAGATAGATGGACACGTAGGGACTTTCAAACAGAATACAGTGATGTTGATTCCCTCAAAGCTTATGCCTTGCGTACTATCAAACAGTATGCTTATCCTCTAATGACATATACTGTCAGCGTTCAATCTAGTTTCATTGAAAACTACAAGGACATTAATCTAGGTGACACTGTTAAAATCATCGATAATAATTTTATAGGTGGTTTAGCCCTCGAAGCGCGTGTATCTGAAATGATTATCAGCTTTGACAATCCTACAAACAATTCGGTTGTTTTTACTAATTTCAGAAAGTTGGATAATAAACCGTCTAGCGAATTGCAACAACGTATTGATGAGATAGTTTCTAAGTCTTTGCCATACAAAATTGAGATAAGGACCACAAACGGTACAGTATTTAAGAATGGTATTGGTCGCTCTACTGTTAAACCAATTTTAAAGCAAGGCGATAAAATTGTTAATGCAACTTATCGATTTGTAATTGACGGTACTATTAAATACTCAGGTATGACCTATGATATGGTAGCATCAGAGATTAACCAACCAACCACGCTTACTATCTCAGCGTGGGTAGATAACAAAGAAGTAGCTTCAGAAGAAGTTACTTTTGTAAATGTATCAGATGGTAAACAAGGACCTAAGGGCGATAGAGGTAATGACGGCTTACCTGGCAAAGACGGGGTAGGCTTGAAATCTACCACAGTCACTTACGGCATGTCTGACAGTGATACTATCATGCCTACGAGTTGGACTGCAAACCCACCAACTTTGATTAAAGGGAAATACCTATGGACTAAAACTCAGTGGACGTATACTGATAGTACAAGTGCGACTGGTTATCAAAAGACTTATATTGCTAAAGATGGTAATAACGGTAATGATGGCCTTCCGGGTAAAGATGGCGTTGGTATACGTAATACCACAATCACTTACGCACAAGGAACATCTGGAACAGTAGCACCAACGAATGGTTGGAGTACTCAAGTGCCGAATGTACCTGCTGGACAATACCTATGGACTAAAACAGTCTGGGATTATACTGACAACACTAGTGAAACTGGATATTCAGTCGCTAAAATGGGCGAGCAAGGTCCAAAAGGCGACCGTGGTAATGATGGGAAGACTACATATTTTCACACAGCATGGTCTTACAGCGCAGACGGCACTGATAGGTTTAGTACTGTTTATCCAAATTTGAATCTGTTAGTTAATAGTTCAGCTAAAACCAAAGATGGGTTCTTTAAAGACTTCGACAAAGTAGAAAATGGCTACGGAGAAGTTACAATGACGGGAACTAATACATGGGTTGCTAGAAACATGTGGGATGGTTTCTCTATTAAACCTAGAGATTATAAACCCGGCGATAAGTACACAATGAGTATGGACGTTATGATCACAAGTTGGAATCTCCCTGCTGGAACACATCTTGACGAGTTTTGGATTGGTCAGCGATACTCTCATGGCGGAGGATTACACTCATGGAAGCGTATTTGTGCTATTGATTTACCTAAAGACCCTAGTAAAATGCTGAACCAATGGATAAAAATAACACAAACGTCAACGATACCTCCGTATGAAGACCCCGCTATCAACACAGAAGCAATCTTTATGACTAAATTTACTGGTCCGAGTGAAGGTAGTTTCACGATAAGGATTAGAAAACCAAAACAAGAACCAGGCGAAACCGCCACTCCATACATGCCATCAGCTAGCGAAGCCACAACTGCTGACTATCCAAGTTTCATCGGACACTACACAAACTATACACCAGTAGATAGTCCTAATCCTCGAGATTACACTTGGAGTCTGATACGAGGAAACGACGGGAAGGATGGAGCAAATGGTGGAGAGAATCTAATTGTTAATTCAGCATTCCCAGAAAATATTGACGGATGGGGTTTTTGGGACGCAAGTACACCTAATAACAATCTTCATATAGATACACATGGATTTTACTATAACGGAACAAAACCCCTTTTTAGATTAGACAATAACACCAATGGTGTGGTTCCTGCATCAACAAAACGTTTTCCAGTCAAACGCAACACTGATTATTCATTTAATATTCAGACTTTCGCTACTGGTGATATCAAGGGCTTAGATATCTATTTTTTGGGTAGGAAGGCGAATGAAACTGACAAGGAATTGACTAAAGTGATCCATTTAAAAACACATACAGGTTCACCATCAACCACACAGACGGTTAAATGGCATCTAATATTTAACTCTGGAGATTGCGACGAAGGGTTCATTCGTATTAATAACAATGGCACTACTGACGGTAAAACTTCTACGCTATTTTTTGCAGAACTAGACTGCTATGAGGGAACCACTGACCGAGCGTGGCAAGAGTCGTCGAAAGATTTAGAAAAACAGATAGACACCAAAGCCGATGATGTCCTAACACAAGCACAACTCAACAGACTGAACGAAACGAACTCTATTATTAAAGCTGAATTAAACGCTAAAGCATCACTTGATACACTCAATCAGTGGGTGGAAGCCTATCAAAATTTTGTTAACGCAAACAATGCCAATCGTGCACAAGCTGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACTAAACTAGAAAACGACTTAAATGATATGTCAGAACGTTGGAATTTTATCGATAGCTACATGGCAGCATCAAATGAAGGTCTTGTTGTTGGTAAAAAAGATAAATCAAGCTCTATCATGTTCAATCCAAACGGGCGTATCTCAATGTTCTCAGCTGGGAACGAGGTAATGTACATTTCAAAAGGTGTCATCCATATCGAAAACGGTATTTTCTCTAAAACTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTCATTAGATACGTAGGAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
15156de0782713b1eee0c3e55a18ba3af9dda26138a8b8c4f4a68c8ab4a03fc2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7209
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank