Protein

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UniProt accession
P89922 [UniProt]
Protein name
Pectate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
NSVRVYVIGGNGYLEGSKTVYIEGIKFYGGDNPFEATNTSSSDNLNVYFKDCEFKYGYKDGFSNGLTIKGARQVFLQNCIAARNQRDGFNYHIYNNINPNVIEIDCVGYNNGIGHAEDNNNGSTIHELGNIIRVNGMYFGNKGPNVADVGGSNAWAIGCTGYKSISTSTSSNVNFQNQDGKTWLDGCVAYASTVDISEAGTGKVYARRSLKTNQIFETTEY
Physico‐chemical
properties
protein length:221 AA
molecular weight: 24145,19970 Da
isoelectric point:5,62060
aromaticity:0,12217
hydropathy:-0,48100

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
P89922
1 221
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0047
Central domain 11 210 201 0,9977
C-terminal 211 221 10 0,2697
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-210
C-terminal
211-221

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage 12826
[NCBI] 		57476 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
41c45d873621e564f15e64a83903b88799f03029128eb4def3dbf523b5a69892
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8464
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
— — 9139898 PubMed