Protein

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Genbank accession
WCD55576.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MAAKTPISAPLGRVSDDDTYPLVDNNDAINALVFRATTAERDKIPLDMRTGCVCVVYSEKKAYKWSGSTWDEYYLPGGVIVADTDGAIPSLRHSIIFDDSFAIQSAGDSGAGVLIGLSTAVKQALAKKTSTGGAMTINGQSISDLTVMPPLQIDGSQDQKRLLVSPQTYEPHHAEGYLAYFDVDEMILGNSVPSTGRRKGGIWADSIAWGANNVDLYAERETKSVILQEADEKDPNATGGVPILCGLHIGFYGKAPQDGTIECKLVNNMNGDILEDASGQPIGIIHHYKKDDPLKPLTAIQVYRAKGAVKATWIPKHTFTDDPVRLEDWAVAGSCMMFQQMGNGEAISPVLNEFQEIVGKPIKVMQKYYGVSVVGNKWALSFDEPRQTITAGSASDSVIGVDFENPTDVSVAIENNLFNAKDTGKLCLFSLAVELSEEDTRNLRGKTVTVRTQVLNRLSATKLCMFVYTGNLKDVTRPVLTGISNDAFTLSQGWDNHDNAFLPEHPEGSFHPIEKDFVIPNAAGLVMFAVLPTEEQSPMDVSIKPIEVDVKDPFTAYEVSINPGSDQLQFQIVNSQFVTNLKIWGVNPTKTNLPMGEKPSTVGKAPVKLFAEEDDAAAYRGGIILEDITEYKIELWLSVSNYFKTKLSADETLRFWVEDEEGDAVADSEASLVLKDGDYTAHLVNWHFDYATTKKNTKLRLYGQSSSKKVGFLTNGTYNAAGVSVDAKIIP
Physico‐chemical
properties
protein length:731 AA
molecular weight: 79726,06700 Da
isoelectric point:4,88590
aromaticity:0,08345
hydropathy:-0,22298

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCD55576.1
1 731
Domain Start End Length (AA) Confidence
N-terminal 1 166 166 0,9798
Central domain 167 365 200 0,3294
C-terminal 366 731 365 0,9676
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-166
Central
167-365
C-terminal
366-731

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Fayden
[NCBI] 		3017795 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCD55576.1 [NCBI]
Genbank nucleotide accession
OQ079153.1 [NCBI]
CDS location
range 36104 -> 38299
strand +
CDS
ATGGCAGCAAAAACCCCAATATCAGCACCACTAGGTAGAGTTAGCGACGACGACACTTACCCACTAGTAGATAACAACGATGCAATTAACGCTTTGGTTTTTAGAGCGACGACTGCAGAGCGAGATAAAATCCCTTTGGATATGCGTACAGGTTGCGTGTGCGTCGTATATTCAGAAAAAAAAGCATACAAGTGGAGCGGATCGACGTGGGATGAATATTATTTGCCAGGTGGCGTTATTGTTGCAGACACCGACGGAGCCATACCATCACTGCGACACTCTATTATTTTTGATGACAGCTTTGCCATACAGTCAGCTGGCGATTCTGGAGCTGGTGTTTTAATTGGTCTTTCCACTGCAGTGAAACAAGCTTTAGCCAAAAAAACTTCGACCGGCGGAGCGATGACGATAAATGGTCAAAGCATTAGTGATCTGACCGTAATGCCTCCATTACAGATTGATGGTTCTCAAGATCAAAAGCGATTATTAGTAAGCCCACAAACCTACGAACCACATCATGCGGAGGGGTATTTAGCCTACTTCGATGTGGATGAAATGATTTTAGGTAACTCGGTTCCGTCAACAGGGCGAAGAAAAGGCGGTATTTGGGCTGACTCCATTGCATGGGGAGCCAATAACGTAGATCTCTATGCAGAGCGAGAAACTAAATCAGTAATTTTGCAGGAAGCAGACGAAAAAGATCCGAACGCCACTGGCGGAGTTCCCATCCTATGTGGCTTACACATAGGATTTTATGGTAAAGCGCCACAGGATGGCACAATAGAATGCAAGCTCGTTAACAATATGAACGGGGATATTTTAGAGGACGCTTCCGGTCAACCTATTGGTATTATCCACCACTATAAAAAAGATGACCCTCTCAAGCCTTTAACCGCAATTCAAGTATATCGAGCAAAAGGTGCAGTAAAAGCAACTTGGATTCCAAAGCACACTTTTACTGACGACCCTGTGAGGCTGGAAGACTGGGCGGTTGCTGGTTCTTGTATGATGTTTCAGCAAATGGGTAATGGCGAGGCTATTAGTCCGGTACTTAACGAGTTTCAAGAGATTGTTGGAAAGCCTATAAAGGTAATGCAAAAATACTACGGTGTTTCTGTAGTTGGCAATAAATGGGCTTTAAGTTTTGACGAACCACGACAAACCATAACAGCGGGATCAGCTAGCGACTCAGTAATCGGCGTTGACTTTGAAAATCCCACCGACGTAAGTGTTGCAATTGAGAATAACCTCTTTAATGCAAAGGACACTGGTAAACTTTGCCTATTTAGTCTTGCTGTTGAACTTTCAGAAGAAGACACCAGAAATCTAAGAGGCAAGACAGTGACGGTTAGAACGCAAGTTCTAAATAGACTATCTGCCACCAAGTTGTGCATGTTTGTTTATACCGGCAACCTAAAGGACGTAACTAGACCGGTTCTTACTGGCATATCAAACGACGCTTTTACTTTGAGCCAAGGTTGGGACAACCATGACAATGCATTCTTGCCAGAGCATCCAGAAGGTAGTTTTCATCCAATTGAAAAAGACTTTGTCATACCAAACGCAGCGGGTCTAGTTATGTTTGCAGTGCTACCAACCGAAGAGCAAAGTCCGATGGATGTGAGCATAAAGCCTATTGAAGTTGACGTTAAAGACCCGTTTACAGCGTACGAAGTAAGTATTAATCCTGGCTCCGATCAATTGCAGTTCCAGATTGTTAATAGTCAATTTGTAACAAACTTGAAGATATGGGGCGTTAACCCCACTAAAACGAACCTACCAATGGGCGAAAAGCCTAGTACGGTAGGTAAGGCGCCGGTCAAGCTTTTCGCCGAAGAGGACGACGCAGCAGCGTATAGAGGCGGCATTATTCTTGAAGACATCACGGAATACAAAATCGAACTTTGGCTAAGTGTTTCCAATTACTTTAAAACAAAGTTAAGCGCAGATGAAACTTTGCGTTTCTGGGTGGAGGACGAGGAAGGGGATGCCGTAGCGGATAGCGAAGCTTCTTTAGTTCTAAAAGATGGTGATTACACGGCTCATTTGGTGAACTGGCACTTTGATTATGCGACTACCAAAAAAAACACCAAGCTGCGTCTATACGGGCAAAGCTCCAGTAAGAAAGTCGGATTTCTTACAAACGGAACCTACAATGCGGCTGGAGTTTCTGTTGATGCTAAAATTATCCCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
fb8f3bfc54de864ed88ef875bdd4331fa85e7428d30b38061de0c281990a4e29
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4199
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50