Protein

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Genbank accession
AXC33161.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MIYTTGTIAISGNTLTGTGTNFTASGSLIRNGCTVIALTSPAQVFQITAIGSATSLTVTPAANPAIPAGTKYAILLSDSLSVDGLAQDIAETFTMYQRYMSGFADVMNGTSDVTITINGVAITVPGQKSLAKKGDNSDITSLTGLTTALSVAQGGTGAKNAADARTNFGLGTAALKNNVNGTLGDVLLQGYGNLVKIQQYNPGLPLGQTGVYGQSGAAGWKPSTAGSGFMTAYADDRRQQYWISIEQGFYVRHISDAAFDVGANVYPWTQMQAVGTSDINFKKDITELDTNVALANIDAMEFVSFRYKNDDSGAVRRGVIAQQVEKIDPQYVHSAEGVGKMTLDLNPLLMDALAAIKALNAKVEELSKQVDELKQGGA
Physico‐chemical
properties
protein length:378 AA
molecular weight: 39567,06750 Da
isoelectric point:5,01527
aromaticity:0,07143
hydropathy:-0,02407

Domains

Domains [InterPro]
DC_0022
STR
1–378
DC_0022
IPR030392
CHP
277–370
IPR030392
IPR030392
CHP
277–332
IPR030392 Coil
AXC33161.1
1 378
Architecture
STR
STR 1-378
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AsXd-1
[NCBI] 		2182324 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC33161.1 [NCBI]
Genbank nucleotide accession
MH178096.1 [NCBI]
CDS location
range 18837 -> 19973
strand -
CDS
ATGATTTATACCACCGGCACTATCGCCATCAGCGGAAACACCCTTACAGGTACTGGCACAAACTTCACTGCATCTGGCTCACTTATTCGTAACGGCTGCACTGTTATCGCGCTGACCAGCCCAGCGCAGGTTTTCCAGATTACCGCGATTGGAAGCGCAACCTCTCTCACCGTTACGCCAGCTGCTAACCCTGCTATCCCTGCTGGAACCAAATATGCCATTCTTCTGAGCGACAGCCTGAGCGTTGACGGTCTGGCGCAGGACATCGCTGAAACCTTCACTATGTACCAGCGTTACATGAGTGGGTTCGCTGATGTGATGAATGGGACATCTGACGTAACTATCACCATCAATGGTGTGGCCATCACTGTGCCGGGTCAGAAATCGCTGGCAAAGAAAGGGGATAACAGCGACATCACAAGTCTTACCGGTCTTACTACAGCACTAAGCGTGGCGCAGGGTGGGACTGGTGCGAAAAATGCGGCAGATGCCCGCACAAACTTCGGGCTCGGAACCGCAGCACTCAAAAACAATGTAAACGGTACGCTCGGTGATGTCTTGCTGCAAGGATATGGCAACCTCGTTAAGATCCAGCAGTATAATCCCGGATTACCGCTGGGGCAGACCGGGGTATACGGTCAGTCAGGCGCCGCAGGTTGGAAACCTTCAACAGCGGGGAGCGGCTTTATGACAGCATACGCGGACGACCGCCGCCAGCAGTACTGGATCAGTATTGAGCAGGGATTCTATGTACGCCATATTTCTGACGCGGCCTTTGATGTTGGTGCGAACGTTTACCCGTGGACGCAGATGCAGGCCGTCGGTACATCCGATATAAACTTTAAAAAAGATATCACTGAGCTTGATACGAATGTAGCGCTGGCTAATATCGACGCTATGGAATTCGTATCGTTCAGATATAAGAATGATGACAGTGGGGCGGTACGCCGTGGTGTAATCGCGCAGCAGGTTGAGAAGATTGACCCGCAGTACGTTCACAGCGCTGAGGGAGTGGGTAAAATGACCCTTGACCTTAACCCATTGCTTATGGATGCTCTGGCCGCCATTAAGGCACTTAACGCAAAGGTAGAAGAACTTAGTAAACAGGTTGATGAGCTAAAACAGGGTGGAGCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d50f9b40d59624d3f50c4651d76bd5bcd9a0513e788b0f21ac6f9f2cff5bb38b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7980
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome analysis of bacteriophage AsXd-1 Ting,W., Fei,M.Y. and Quan,L. 2018-08-10 — GenBank