Protein

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Genbank accession
UGO54084.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSEYQKKITELPAKATVGENDVFPTADKNDTSKVTLNQIRESIWFKNAFPDLASGIAGTEVDGVFYVFTDDSKLNVNEYIRTSGGAVAIQDADGNPVRLPTSNLISYMGTELAYGMMPQVNSFDLLRKLKPINDGFRIVLRAYYEDNTAGGGEFIGRIGTAKDNGGTIAAGTGYYWQRVDSTELTPEMFGAYGDGQHDDDRAVQSALNVVQNKDVAIIDGKGNYRFGAPIKIFGFGKGLNLKLRTITTNADKYTFTDWKTASPLIQIGDASNNGSMVGLNINIDWVDGGSVADVVQVVNYGCGGSHIHIERMINVVNGVSTPGIKFPSSSVMITGGYWSAGLGQGIRIGKVSAANTYTNEGWIVDVNFITGFRMGGIYSTNGGMFLNIRGQSDFCGRFLSRVSFDTSTGLNAGDSVTFNDKVYEVIAAYQKVKGTFSLLLNEGVNVSSVGSSFKVGDTVTIGANTLTVTEVLTPGTSNWYPDVIHDYYNSAGMGRCKIDMPYCGGVEGSFLYSSDIWCGNSDIARPKQMLGHGYTHSGTIATWWDTYLNRQIMDVNDSYIAPYRHLNMRTNRIFGVEVYKALAKVTTSAVRTFAKAGDGTVPSVREKWVIEYTGTLMGVYGKYEVYVGNSSLELVKIYADNIVTLSISGMTINAVQGAQDTLITTFNLQRIF
Physico‐chemical
properties
protein length:672 AA
molecular weight: 73044,38760 Da
isoelectric point:5,55126
aromaticity:0,10714
hydropathy:-0,13110

Domains

Domains [InterPro]
DC_1164
ATT
2–120
DC_1164 IPR012334 DC_1469
DC_0717
ATT
95–210
DC_0717
UGO54084.1
1 672
Architecture
ATT
STR
RBD
ATT 2-210 | STR 211-310 | RBD 394-672
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGO54084.1
1 672
Domain Start End Length (AA) Confidence
N-terminal 1 198 198 0,9898
Central domain 199 569 372 0,9770
C-terminal 570 672 102 0,9795
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-198
Central
199-569
C-terminal
570-672

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaM_Haymo
[NCBI] 		2902685 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGO54084.1 [NCBI]
Genbank nucleotide accession
OL539468.1 [NCBI]
CDS location
range 123340 -> 125358
strand +
CDS
ATGAGCGAATATCAGAAGAAAATAACTGAACTTCCGGCTAAAGCAACAGTGGGTGAAAATGATGTTTTCCCCACAGCCGACAAAAACGACACTAGTAAAGTTACCCTAAACCAAATCCGTGAATCTATCTGGTTCAAAAACGCATTCCCCGACTTAGCCTCAGGGATCGCGGGGACTGAGGTAGACGGTGTCTTCTATGTCTTTACTGACGATTCTAAACTTAATGTAAACGAATATATTCGAACTTCCGGCGGCGCGGTCGCCATTCAAGATGCCGACGGTAACCCGGTCAGATTGCCCACTAGTAATCTAATCAGTTACATGGGAACTGAACTGGCGTATGGCATGATGCCACAAGTTAATAGCTTCGATCTATTGCGTAAGTTGAAGCCTATTAACGACGGATTCAGGATAGTTCTGAGAGCCTATTACGAAGACAATACTGCAGGAGGCGGTGAGTTCATCGGACGCATTGGCACGGCAAAGGATAATGGAGGTACCATCGCTGCGGGTACTGGTTACTACTGGCAACGCGTGGATAGTACCGAATTAACTCCAGAGATGTTCGGAGCCTATGGCGATGGTCAGCACGACGATGACCGTGCTGTGCAATCCGCTTTGAACGTAGTACAGAACAAAGATGTTGCTATTATCGATGGTAAAGGTAATTATCGTTTCGGCGCGCCGATTAAAATCTTCGGATTCGGCAAAGGGCTTAACTTAAAGCTCCGTACGATTACGACTAATGCCGATAAATACACCTTTACCGATTGGAAAACGGCCAGTCCGCTAATCCAGATAGGCGATGCCTCCAATAACGGTTCGATGGTTGGTTTAAATATTAATATCGACTGGGTTGATGGCGGGAGTGTGGCCGATGTGGTTCAGGTAGTCAATTACGGTTGCGGCGGTTCCCATATCCACATAGAGCGAATGATCAACGTAGTTAATGGAGTCAGTACCCCAGGTATAAAATTCCCTTCTTCGTCGGTGATGATAACCGGTGGATACTGGAGCGCTGGGTTAGGTCAGGGTATCCGTATCGGTAAAGTTAGTGCGGCCAATACTTACACCAACGAAGGTTGGATAGTAGATGTTAACTTTATTACCGGTTTTCGCATGGGCGGTATCTATAGTACCAACGGCGGTATGTTCCTTAACATTCGTGGGCAAAGTGACTTCTGCGGACGTTTCTTGTCTCGTGTTAGTTTTGATACTAGTACCGGACTGAACGCCGGCGACTCGGTAACTTTCAACGATAAAGTTTATGAGGTTATCGCCGCTTATCAGAAAGTTAAAGGTACTTTCTCTCTTCTTTTGAACGAAGGTGTGAACGTTTCCTCCGTGGGATCCTCATTCAAAGTTGGCGATACTGTTACGATTGGCGCGAACACATTGACCGTAACAGAAGTACTTACCCCTGGAACCAGTAACTGGTACCCTGACGTTATCCATGATTACTACAACAGCGCCGGCATGGGCCGTTGTAAAATAGATATGCCGTACTGCGGTGGGGTAGAGGGTAGTTTCCTTTATAGCTCAGATATCTGGTGCGGTAACTCCGACATCGCCAGACCGAAACAAATGTTGGGTCATGGGTACACTCACTCTGGCACGATCGCTACTTGGTGGGATACTTACCTTAACCGTCAGATCATGGATGTTAACGATTCCTACATTGCCCCATATCGACATTTAAACATGCGAACTAATCGCATTTTTGGTGTCGAGGTTTACAAGGCTCTGGCCAAAGTAACTACCAGCGCGGTTAGAACGTTCGCTAAGGCGGGCGACGGTACGGTCCCATCCGTACGTGAGAAGTGGGTAATCGAGTATACTGGGACGTTAATGGGCGTATATGGTAAGTACGAAGTTTATGTTGGTAACTCTTCATTGGAGTTAGTTAAGATCTACGCCGACAATATTGTCACGTTAAGTATCAGTGGCATGACTATCAACGCAGTACAGGGTGCCCAGGATACCCTCATCACCACTTTTAACCTACAGCGTATTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aa0d6a70070822956764567deebadaab42071fcdce9c2cb9e9dcc9ff7f42e268
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7212
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50