Protein

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Genbank accession
WZX06535.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,98
TF
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MDNQVYIDDNDFQMVEAGDQVTLNFASTEVLRVVDESDKVWVGYEDQDYFAFPYSTLRVGTVVVTPSGGTPDPGPGPGTVSWGSITGSLSSQADLVAALAAKVNSPVTWGSIGGVLSAQTDLNNVLVKKVEHYVTTDVSFLYTWKELASAKVTSSSDALYGAAPYSPVIMQQLPSPDDTVGIAFAASSDGAGRFWVRSRNSASSSDPAQRWTTWKELALVGADTSYVKKTGDQMTGPLWIQGQALRVSGWGGTANSGVIYFGAADSFIYKSGGNYSFKNEEGGYTANLAQGGNIITSAGGQAINVSLRVQPVAGSSDQIFMRAEGASGVTIDSVNGANSAYAPLSIRGTSISLNGTTNVNASLNAQRLNAFGGTFGTQTGLIGRGWTGGVTRWLDVMESDGSFSLYSYNTAGADNRRAYNIKTAVAGGAAQFAVDGFMTVNGASFGADATSALGVMGGVKSYGSAATLAVGARDGAAEWDMYATGNLFRIWVAGIGDRWTLGTGGEMTTARARLTDGAPLQFTFAGAATGTVYIWGMNAAGDDMASINRLGTSSYRLNWNGAAVLSSRLTVGDQIYLNGGWFRSQQSGTGWYHEVHGGGWFMQDNTWIRTYNNKGVLITGAAGADGGLRMEGTSPTISCYDSDRGSTSWIHYNDGNHGFLDDNSFAWSCFRNSGNDWQVQRNVIAYASDERLKMNIKDVDYRRINDFYEGLRIMQFDWNPAALRQYKISIDPTREEIGGVAQHLQRIFPDAVKINEAHNGVGKNGYKPDILTILWEKTIPLAHAEIQMLRRRVAQLEQSQHRIDNLERMLHELMSKQQVH
Physico‐chemical
properties
protein length:820 AA
molecular weight: 88174,85020 Da
isoelectric point:5,36199
aromaticity:0,10244
hydropathy:-0,24866

Domains

Domains [InterPro]
DC_1616
RBD
180–616
DC_1616 IPR030392
IPR007001
RBD
559–633
IPR007001 IPR030392 Coil
DC_0971
RBD
562–819
DC_0971
WZX06535.1
1 820
Architecture
RBD
RBD 180-819 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WZX06535.1
1 820
Domain Start End Length (AA) Confidence
N-terminal 1 576 576 0,1734
Central domain 577 775 200 0,2357
C-terminal 776 820 44 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-576
Central
577-775
C-terminal
776-820

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage phiXF1
[NCBI] 		3141530 Viruses >
Host Xanthomonas campestris pv. campestris
[NCBI] 		340 Bacteria > Proteobacteria > Gammaproteobacteria > Xanthomonadales > Xanthomonadaceae > Xanthomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZX06535.1 [NCBI]
Genbank nucleotide accession
PP475461.1 [NCBI]
CDS location
range 4129 -> 6591
strand -
CDS
ATGGACAACCAAGTCTACATCGACGACAATGACTTCCAGATGGTCGAGGCAGGAGATCAGGTCACTCTGAACTTCGCTTCGACTGAAGTACTGCGAGTCGTCGACGAGTCGGACAAGGTGTGGGTCGGCTACGAGGATCAGGACTACTTCGCATTCCCCTACTCCACTCTGCGAGTAGGGACTGTCGTTGTGACTCCGAGCGGAGGCACTCCTGATCCAGGTCCGGGTCCCGGAACTGTCTCGTGGGGTTCGATCACTGGCTCGCTGAGCTCGCAGGCTGACCTCGTGGCCGCACTCGCAGCTAAGGTCAACTCTCCGGTGACGTGGGGTTCGATCGGTGGTGTGCTGAGTGCACAGACTGACCTGAACAACGTGCTGGTCAAGAAGGTCGAACATTACGTCACCACTGACGTCTCGTTCCTGTATACGTGGAAGGAGCTGGCCTCGGCGAAGGTCACGAGCTCCAGTGATGCACTGTACGGTGCGGCTCCGTACTCTCCAGTGATCATGCAGCAGCTACCGTCGCCTGATGACACGGTAGGTATCGCATTCGCAGCCTCCAGTGATGGAGCTGGTCGGTTCTGGGTCCGCAGTCGTAACTCCGCGAGCAGCAGTGATCCTGCGCAGCGGTGGACTACTTGGAAGGAGCTGGCACTCGTAGGGGCAGATACCTCCTACGTCAAGAAGACTGGCGACCAGATGACCGGGCCGCTGTGGATTCAAGGTCAGGCTCTCCGCGTGTCTGGATGGGGTGGCACTGCTAACAGTGGCGTCATCTACTTCGGTGCTGCTGACAGCTTCATTTACAAGTCCGGTGGCAACTACTCCTTCAAGAATGAGGAGGGTGGATATACTGCGAACCTCGCGCAGGGTGGCAACATCATCACCAGCGCAGGTGGTCAGGCGATCAACGTATCGCTGCGAGTCCAGCCCGTCGCAGGGTCCAGTGATCAGATCTTCATGCGTGCCGAGGGTGCGAGTGGAGTTACGATCGACTCGGTCAATGGTGCCAACAGTGCGTACGCGCCACTGAGCATTCGCGGTACGTCGATCAGTTTGAATGGTACGACCAACGTCAATGCCTCCTTGAACGCTCAGCGTCTCAATGCGTTCGGTGGCACTTTCGGTACCCAGACTGGTCTGATCGGTCGTGGCTGGACTGGTGGTGTCACTCGCTGGCTTGATGTAATGGAGAGCGACGGTTCGTTCTCCTTGTACTCGTACAACACTGCAGGTGCTGACAACCGTCGAGCCTATAACATCAAGACGGCAGTCGCAGGTGGTGCAGCTCAGTTTGCAGTCGATGGGTTCATGACTGTCAACGGTGCATCCTTCGGTGCCGATGCTACGTCAGCTCTCGGTGTCATGGGTGGTGTCAAGTCGTATGGTTCAGCTGCGACTCTCGCGGTAGGTGCTCGAGATGGTGCTGCTGAGTGGGACATGTACGCCACTGGCAACCTGTTCCGCATCTGGGTTGCTGGCATCGGTGACCGTTGGACGCTGGGGACCGGTGGTGAAATGACCACTGCTCGAGCTCGTCTGACGGATGGTGCACCACTCCAGTTCACCTTCGCAGGTGCAGCGACTGGTACTGTCTACATCTGGGGCATGAATGCTGCCGGCGATGACATGGCTAGCATCAATCGACTCGGCACGTCCTCGTACCGACTCAATTGGAATGGCGCTGCTGTCTTATCTAGTCGACTGACCGTCGGTGACCAGATCTACCTCAATGGTGGCTGGTTCCGTAGTCAGCAGTCCGGCACTGGCTGGTACCATGAAGTCCATGGTGGCGGCTGGTTCATGCAGGATAATACGTGGATCCGAACCTACAACAATAAGGGTGTATTGATCACCGGTGCAGCTGGTGCTGATGGTGGTCTCCGCATGGAGGGTACCTCCCCGACGATCAGCTGCTACGATAGTGATCGAGGCTCGACCAGTTGGATCCACTACAACGATGGCAACCATGGCTTCCTGGACGATAACTCGTTCGCATGGTCCTGCTTCCGTAACAGTGGCAACGACTGGCAGGTACAGCGCAACGTCATCGCGTACGCATCTGATGAACGTCTGAAGATGAACATCAAGGACGTCGACTACAGGCGCATCAACGACTTCTACGAAGGACTGCGCATCATGCAGTTCGACTGGAATCCGGCAGCTCTGCGACAGTACAAGATCAGCATCGACCCTACTCGTGAGGAAATCGGTGGCGTCGCTCAGCACCTCCAGCGTATCTTCCCTGATGCAGTCAAGATCAACGAGGCTCACAACGGTGTCGGCAAGAATGGCTACAAGCCTGACATCCTGACCATCCTCTGGGAGAAGACGATCCCACTGGCGCATGCTGAGATTCAGATGCTGCGTCGCCGGGTGGCTCAGCTGGAGCAGTCCCAGCATCGCATCGACAACTTGGAGAGGATGCTCCACGAGCTGATGAGCAAGCAGCAGGTGCACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
10e906cdf4e99bba16f6166204bae44f0f4f8802832739e7f0234bfdb02dc71f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5375
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50