Protein

Genbank accession
ADO99810.1 [GenBank]
Protein name
YadA domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MATRKISDLTLLGVDQVSSSDTLLLLDNSDPTDQNKRSAVGSIFTAVPSGTYTAPGVRFEGKTATGVFSETQGQVGLAMGNARLNLQKVGTTLNIQARDDADTNLDFTISAQGTGKIRLGSILAVNDLNFIVPNSIDETKVAKFSSSNLVAGITNIYSFPPNTDADANFTDELVTLKAAQTIENKTIVSPSFSGSVAMVDFATTGNATIGNEASDSLTVNAGSIFSASATFANTLIAQQSLTLTGDLIANSHIDMVDDKIIKLGTDDDLQIVYSNGTDASTITDTSTNGLTISSADVELASGSNKFFKASTTDTVIYHNNATRVTTTATGININGAIDAVTSITGSGDIAIATNKFTLDSANGNAVFGGNITGGGDITASSGTAFQLGSSSSAKLGVGRAAATYNLEVEGDIYSTGSTIIAGNGSVGKFILQKGAAAIGIHFTNNVGTDEAVIDASGRFGIGKTPAKKLDVSGDAGIDGDITIVTTNPTNNTGGKISARELVLTDPSTGATTTLNAISGGGGLSRGKVFFLSN
Physico‐chemical
properties
protein length:533 AA
molecular weight: 54293,37100 Da
isoelectric point:4,52725
aromaticity:0,05253
hydropathy:0,01388

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-HM2
[NCBI] 		445696 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Prochlorococcus marinus subsp. pastoris str. CCMP1986
[NCBI] 		59919 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO99810.1 [NCBI]
Genbank nucleotide accession
GU075905 [NCBI]
CDS location
range 20298 -> 21899
strand +
CDS
GTGGCAACTCGTAAGATATCTGACCTTACATTGTTAGGAGTAGATCAAGTATCATCATCTGATACTCTACTGTTACTAGATAACTCAGACCCAACCGATCAAAATAAAAGATCCGCAGTAGGAAGTATTTTTACTGCAGTTCCGTCTGGAACATACACAGCACCTGGCGTTCGTTTTGAAGGCAAGACTGCTACTGGTGTATTTTCTGAGACTCAGGGACAGGTTGGTCTTGCTATGGGAAATGCGAGATTAAACTTACAAAAAGTTGGAACTACTCTTAACATACAGGCAAGAGACGATGCTGATACTAACCTAGACTTTACTATATCTGCACAGGGTACTGGTAAAATACGTCTAGGTTCTATTTTGGCAGTTAATGACCTTAACTTTATCGTACCTAACTCTATTGATGAGACAAAGGTAGCAAAGTTTAGTTCATCTAACTTAGTTGCGGGTATTACTAACATCTATTCTTTCCCTCCTAACACAGATGCGGATGCGAATTTCACTGATGAATTAGTAACACTTAAAGCTGCACAGACTATAGAGAACAAGACTATTGTATCTCCCAGTTTTTCTGGTAGTGTTGCAATGGTTGATTTTGCTACTACTGGTAACGCAACTATTGGTAATGAAGCGTCTGACAGTTTAACTGTTAATGCAGGGTCAATATTTTCTGCATCTGCAACGTTCGCTAACACTTTGATCGCACAACAATCACTTACCTTAACAGGTGATTTGATTGCTAACAGTCATATTGATATGGTTGATGATAAGATTATTAAGTTAGGAACTGATGATGACCTTCAAATTGTATACAGCAATGGTACAGATGCATCAACAATAACAGATACATCTACAAATGGTTTAACTATTAGTAGTGCTGATGTTGAACTTGCTTCTGGTTCTAATAAGTTCTTTAAGGCAAGCACAACAGATACTGTCATTTATCATAACAACGCAACTCGTGTAACAACGACTGCAACAGGTATAAACATTAACGGAGCTATTGATGCTGTCACATCTATCACAGGCAGTGGCGACATCGCTATTGCTACTAATAAGTTTACTTTGGATAGTGCTAATGGCAATGCAGTATTCGGGGGGAACATTACAGGTGGTGGCGACATCACCGCATCAAGTGGAACTGCATTCCAACTTGGGTCATCATCATCTGCCAAACTCGGTGTTGGTAGAGCAGCTGCCACGTATAATCTAGAGGTTGAAGGGGATATATACTCTACAGGTTCTACGATTATTGCAGGAAATGGATCCGTTGGTAAGTTCATCCTTCAAAAGGGTGCTGCTGCTATAGGCATACACTTTACTAACAATGTTGGAACCGATGAAGCTGTCATAGATGCTTCTGGTCGTTTCGGTATTGGTAAAACACCAGCTAAAAAGTTGGATGTTTCTGGTGATGCGGGTATTGATGGTGACATAACTATTGTTACAACCAATCCAACAAACAACACAGGTGGTAAAATATCTGCAAGAGAACTTGTTCTTACAGATCCTTCCACAGGTGCAACAACCACATTAAACGCGATAAGCGGAGGTGGTGGTCTCTCAAGAGGCAAGGTATTCTTCTTATCTAATTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
0508b073973a88c2539318c855c3c0ed239d94ff915757bbfb8a89a1e77a0e3c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6048
Evidence 0,6048
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage M4-259 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank