Protein

View in Explore
Genbank accession
QIG73715.1 [GenBank]
Protein name
SGNH hydrolase-type protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSLTLSLGLSINNQLGGGGGGGQTGTLRNVATRNLLPSTSTSGVKSARGRTQMFARDTISSAQFVFPNWLVAQIGGTGPYTEQANLGSITIQAAVEYPVGTTTAILFSGSTTGTIAAGDNLVSDALSISIPADAKFAVRWRINGASGLCYVSATTPAVTSASFGDAFDSSATVNALADNTTNTADAYTNNAIGACYGPIAVLSVSTKESIIAYGTSITHGENDTLDATLDLGIVARGVGMTSGYINCGVRGDSAYRAVNVLGTSNFAKRAALALYATRAIIEYGANDVGTVEARTAAQCLADRATMYAYIKSVAPSIRIYQTTTTPLAASTDSFATTTNQTADATITPKLTSINDAVRAGGISNLDGYYDVSDVVCTARNSGIWKCPASYTPMTSGGGLHPLQAGYRYVRDLGLFQIAATGQTIGLVANRAQVPTNVQNIAANTTARRAHWSHASGEISHIQAVDVGWYLSRSTWLPTAGGSHTIKKYIEYPAGTFHQVTWAAATTLAKSSTSVAKSDVIISSVTGLPLRIPADTQFWERTVVTVGSATTPVIELPANNDTLGLDDGTDLTDKGNSGTITPTAAIWTFGSQGFVGRVGAANAQSVVALGDSLIFAQGDVTNVGTKQGSGWFGRLCDNEGVPYVKIAVPGGKAQNFAQNAFIVHGGNLINQLAFSHVICELGLNDLAVASRTAAQILADLQTIYALIPAAAQLGQTTISTRTDSTSGNYTSVADQTVKTDGNMADLTPLNTSIRAGTANVDFVLDVADAEMSARDSNIHGGPFPPVLDGTHFTSTKAAAIASALSL
Physico‐chemical
properties
protein length:805 AA
molecular weight: 83182,92430 Da
isoelectric point:5,78578
aromaticity:0,06957
hydropathy:0,06870

Domains

Domains [InterPro]
IPR036514
STR
195–412
IPR036514 IPR051532
IPR036514
STR
197–412
IPR036514 SSF52266
SSF52266
STR
203–410
SSF52266 IPR036514
cd00229
ENZ
210–412
cd00229 SSF52266
IPR013830
ENZ
212–407
IPR013830
QIG73715.1
1 805
Architecture
STR
STR
STR 195-412 | STR 590-805
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG73715.1
1 805
Domain Start End Length (AA) Confidence
N-terminal 1 18 18 0,4197
Central domain 19 245 228 0,4213
C-terminal 246 805 559 0,6763
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-18
Central
19-245
C-terminal
246-805

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N2
[NCBI] 		2509585 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG73715.1 [NCBI]
Genbank nucleotide accession
MN988533 [NCBI]
CDS location
range 18271 -> 20688
strand +
CDS
ATGAGCCTCACGCTTTCTCTTGGCCTCTCGATCAATAACCAGTTGGGCGGGGGTGGTGGCGGTGGACAGACCGGCACGCTCCGCAATGTTGCCACCCGCAACCTCTTGCCAAGCACCAGCACGTCAGGCGTCAAATCGGCGCGAGGGCGGACGCAGATGTTCGCCCGCGATACCATCTCATCGGCTCAATTCGTTTTCCCCAACTGGCTTGTCGCGCAGATCGGCGGCACCGGACCTTACACGGAACAGGCCAATCTCGGCTCCATAACGATCCAGGCCGCTGTTGAATATCCAGTCGGAACCACGACAGCGATTCTATTCTCGGGCTCAACGACAGGCACGATCGCCGCCGGTGACAATCTCGTCAGTGACGCCCTGTCCATCAGCATCCCGGCTGACGCCAAATTTGCTGTTCGCTGGCGCATCAATGGCGCATCCGGCCTTTGCTATGTTTCCGCAACAACACCCGCCGTCACGAGCGCGTCTTTCGGTGACGCCTTCGATTCATCGGCCACGGTTAACGCCCTTGCGGACAACACGACAAACACGGCTGACGCCTATACCAACAACGCCATCGGCGCCTGCTACGGCCCTATCGCTGTCCTTTCTGTCAGCACCAAAGAAAGCATCATCGCCTACGGCACGTCGATCACGCACGGCGAAAACGACACGCTTGACGCCACGCTCGACCTCGGGATCGTTGCTCGAGGCGTAGGCATGACGAGCGGCTACATCAATTGCGGTGTCCGCGGTGACAGTGCTTACCGAGCCGTCAATGTCCTCGGCACGAGCAATTTCGCCAAGCGCGCCGCATTGGCTCTCTACGCCACCAGGGCGATCATCGAGTACGGCGCGAACGACGTTGGTACGGTTGAGGCTCGAACTGCAGCACAATGTCTTGCCGACCGCGCCACGATGTATGCCTACATCAAATCTGTCGCGCCCAGCATCCGCATCTACCAGACCACGACAACGCCACTCGCTGCGTCAACCGACTCCTTCGCGACCACGACGAACCAGACCGCGGATGCTACCATCACGCCGAAGTTGACGAGCATCAATGATGCAGTCCGCGCCGGCGGGATCTCCAACCTCGACGGCTACTATGATGTTTCGGACGTAGTCTGCACGGCGCGGAACTCTGGCATCTGGAAATGCCCCGCCAGCTATACCCCGATGACGAGCGGCGGCGGCCTTCACCCGCTCCAGGCTGGCTATCGCTATGTCCGCGACCTCGGCCTGTTCCAGATCGCCGCGACAGGTCAAACGATCGGCTTGGTCGCCAACCGCGCCCAAGTGCCCACCAACGTCCAGAACATCGCCGCGAACACGACGGCTCGACGGGCGCATTGGTCGCACGCTTCCGGTGAAATCTCGCACATCCAGGCGGTTGATGTCGGCTGGTATCTGTCGCGCTCCACATGGCTCCCGACCGCCGGCGGTTCTCACACGATCAAGAAGTACATCGAATACCCTGCCGGCACTTTCCATCAGGTGACGTGGGCAGCGGCAACAACGCTCGCCAAAAGCTCCACGAGTGTCGCCAAGTCAGATGTCATCATCTCATCTGTCACCGGGCTTCCGCTCCGTATCCCGGCCGACACGCAGTTCTGGGAGCGAACAGTGGTCACCGTTGGCAGCGCGACAACGCCTGTCATCGAACTGCCGGCCAACAATGACACCCTCGGCTTAGACGATGGAACCGACCTGACGGACAAGGGCAACAGCGGCACAATTACCCCGACCGCAGCTATATGGACATTCGGTTCTCAGGGCTTTGTCGGAAGGGTCGGAGCCGCCAACGCTCAAAGTGTCGTGGCGCTCGGCGACAGCCTTATCTTCGCGCAGGGCGACGTAACGAATGTCGGCACGAAGCAAGGCAGCGGCTGGTTCGGTCGCCTCTGCGACAACGAGGGCGTTCCCTATGTGAAGATTGCTGTTCCTGGCGGGAAGGCCCAAAACTTCGCCCAGAACGCTTTCATCGTCCATGGCGGCAACCTTATAAATCAGCTCGCCTTCTCGCATGTCATTTGCGAACTCGGATTGAACGACCTCGCGGTTGCAAGCCGAACGGCCGCTCAGATCCTCGCCGATCTCCAGACGATCTATGCCCTAATCCCGGCCGCCGCTCAGTTGGGACAGACCACCATTAGCACCAGGACTGACAGCACCAGCGGCAATTATACCTCTGTAGCCGACCAGACCGTCAAGACCGATGGCAACATGGCAGATCTCACCCCGCTCAACACCTCGATCCGAGCCGGGACAGCCAATGTCGATTTCGTTCTTGATGTAGCGGATGCCGAGATGTCGGCGCGGGATAGCAACATCCATGGCGGGCCTTTCCCGCCGGTTCTCGACGGCACGCATTTCACGTCGACCAAGGCTGCGGCAATCGCGTCCGCCCTATCTCTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4269f8a6965f5c6db46db355ef388b06485a0b5dc785f0c92e4cc908d2879809
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2934
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank