Protein

View in Explore
Genbank accession
UKM36536.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MYKIKDVETRIKNDGVDLGDIGCRFYTEDENTASIRIGINDKQGRIDLKAHGLTPRLHLFMEDGSIFKNEPLIIDDVVKGFLTYKIPKKVIKHAGYVRCKLFLEKEEEKIHVANFSFNIVDSGIESAVAKEIDVKLVDYAITRILKDNATDLLSKDFKEKIDKDVISYIEKNESRFKGAKGDKGEPGQPGAKGDTGKKGEQGAPGKNGTVVSINPDTKMWQIDGKDTDIKAEPELLDKINIANVEGLEDKLQEVEKIKDTTLNDSKTYTDSKIAELVDSAPESMNTLRELAEAIQNNSISESVLQQIGSKVSTEDFEGFKQTLNDLYAPKNHNHDERYVLSSQAFTKQQADSLYQLKSASQPTVKIWTGTENEYNYIYQKDPNTLYLIKG
Physico‐chemical
properties
protein length:390 AA
molecular weight: 43781,78690 Da
isoelectric point:5,28480
aromaticity:0,07179
hydropathy:-0,65821

Domains

Domains [InterPro]
DC_0885
STR
1–366
DC_0885
IPR018913
ATT
4–136
IPR018913 G3DSA:1.20.5.320 Coil
G3DSA:2.60.40.3350
ATT
14–125
G3DSA:2.60.40.3350
UKM36536.1
1 390
Architecture
ATT
STR
ATT 1-136 | STR 137-366 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SauS_Mh1
[NCBI] 		2914853 No lineage information
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UKM36536.1 [NCBI]
Genbank nucleotide accession
OM439673.1 [NCBI]
CDS location
range 38860 -> 40032
strand +
CDS
ATGTACAAAATAAAAGATGTTGAAACGAGAATAAAAAATGATGGTGTTGACTTAGGTGACATTGGCTGTCGATTTTACACTGAAGATGAAAATACAGCATCTATAAGAATAGGTATCAATGACAAACAAGGTCGTATCGATCTAAAAGCACATGGCTTAACACCTAGATTACATTTGTTTATGGAAGATGGCTCTATATTCAAAAATGAGCCCCTTATTATCGACGATGTTGTAAAAGGGTTCCTTACCTACAAGATACCTAAAAAGGTTATCAAACACGCTGGTTATGTTCGTTGTAAGCTGTTTTTAGAGAAAGAAGAAGAAAAAATACATGTCGCAAACTTTTCTTTCAATATCGTTGATAGTGGTATTGAATCTGCTGTAGCAAAAGAAATCGATGTTAAATTGGTAGATTATGCTATTACGAGAATCTTAAAAGATAACGCGACAGATTTATTGAGCAAAGACTTTAAAGAGAAAATAGATAAAGATGTTATTTCTTACATCGAAAAGAATGAAAGTAGATTTAAAGGTGCGAAAGGTGATAAAGGCGAACCGGGACAACCTGGTGCGAAAGGTGATACAGGTAAAAAGGGAGAACAAGGCGCACCCGGTAAAAACGGTACTGTAGTATCAATCAATCCTGACACTAAAATGTGGCAAATTGATGGTAAAGATACAGATATCAAAGCAGAACCTGAGTTGTTGGATAAAATCAATATCGCAAATGTTGAAGGGTTAGAAGATAAATTGCAAGAAGTTGAAAAAATCAAAGATACAACTCTCAACGACTCTAAAACGTATACGGATTCAAAAATTGCTGAACTAGTTGATAGCGCGCCTGAATCTATGAATACATTAAGAGAATTAGCAGAAGCAATACAAAACAACTCTATTTCAGAAAGTGTATTGCAACAGATTGGCTCAAAAGTTAGTACAGAAGATTTTGAGGGATTCAAACAAACACTAAATGATTTATATGCTCCAAAAAATCATAATCATGACGAGCGGTATGTTTTGTCATCTCAAGCTTTTACTAAACAACAAGCGGATAGTTTATATCAACTAAAAAGCGCATCTCAACCGACGGTTAAAATTTGGACAGGAACAGAAAATGAATATAACTATATATATCAAAAAGACCCTAATACACTTTACTTAATTAAGGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e49b7d01c5760f4a88eead0f99656eb46168c42735cfdc19c5ec9cf3a5f338b6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8060
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bioinformatic analysis of a set of fourteen temperate bacteriophages isolated from Staphylococcus aureus strains highlights their massive genetic diversity Suarez,C.A., Carrasco,S.T., Abatangelo,V., Boncompain,C.A., Peresutti Bacci,N. and Morbidoni,H.R. 1987-04 — GenBank