Protein

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Genbank accession
XBS35794.1 [GenBank]
Protein name
BR0599 family protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSFNSRESSLADGQPVRLYQFSRGAIRWSYNSSDRDITYQNQIFRTVPGGITDNGIICSGDPQSDQFVITAPADLDVALLYKSRSPSGAIDLVVYDMHYGDTEAAVSWVGQIGDVDWPTVDSCRITCVSEDELMDQPGLIDTYCRTCTAVVGDHRCKVNLVPYRVTLTPQSISGWVISSGVVAGYVDGWFTGGYVEWQVDGDNYDSRYIERHAGPDLYILGGTEGIPAGGQLRVYPGCDGLAQTCDDKFSNLPNFRGFNAMQGKSPFDGDQVW
Physico‐chemical
properties
protein length:273 AA
molecular weight: 29966,87920 Da
isoelectric point:4,36685
aromaticity:0,10989
hydropathy:-0,27729

Domains

Domains [InterPro]
DC_0733
STR
1–187
DC_0733 IPR018964
IPR011928
Unmapped
19–271
IPR011928
PF09931
ATT
32–159
PF09931 IPR018964
XBS35794.1
1 273
Architecture
STR
ATT
STR
RBD
STR 1-31 | ATT 32-159 | STR 160-187 | RBD 188-264 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XBS35794.1
1 273
Domain Start End Length (AA) Confidence
N-terminal 1 271 271 0,7667
Central domain 272 271 1 0,1093
C-terminal 272 273 1 0,7462
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-271
Central
272-271
C-terminal
272-273

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage GEC_PNG14
[NCBI] 		3158844 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XBS35794.1 [NCBI]
Genbank nucleotide accession
PP836137 [NCBI]
CDS location
range 31387 -> 32208
strand +
CDS
ATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGGCTGTACCAGTTCAGCCGTGGAGCCATCCGCTGGAGCTACAACAGCAGCGACCGGGACATCACTTATCAAAACCAGATTTTCCGCACCGTGCCGGGCGGCATCACTGACAACGGGATCATCTGTTCCGGCGATCCGCAGTCCGACCAGTTCGTCATCACCGCGCCGGCCGACCTAGACGTCGCGCTGCTGTACAAGTCCCGGTCGCCGAGCGGTGCCATCGACCTGGTCGTCTACGACATGCACTACGGCGACACCGAGGCAGCGGTTTCCTGGGTGGGCCAGATTGGCGATGTGGACTGGCCGACCGTGGATAGCTGCCGCATAACGTGCGTGTCAGAAGACGAACTGATGGACCAGCCCGGCTTGATCGACACCTACTGCCGCACCTGCACGGCAGTCGTTGGCGACCATCGCTGCAAGGTCAACCTCGTTCCGTATCGCGTGACGCTGACGCCGCAGAGCATCAGCGGCTGGGTGATCTCCAGCGGCGTGGTCGCCGGCTATGTCGATGGCTGGTTTACCGGGGGCTACGTCGAGTGGCAAGTGGACGGCGACAACTACGATAGCCGCTACATCGAGCGGCACGCCGGACCCGATCTTTACATCCTGGGCGGCACCGAGGGCATTCCGGCAGGTGGCCAACTGCGGGTTTATCCAGGTTGCGACGGGCTCGCGCAGACCTGCGACGACAAATTCAGCAACCTCCCCAACTTCAGGGGGTTTAACGCGATGCAAGGCAAGTCGCCATTCGATGGCGACCAGGTCTGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
653e299628df2eca092a7642d86027ec45c3c1473e2419524c7f30d601e81b5c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9016
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Relevance of the bacteriophage adherence to mucus model for Pseudomonas aeruginosa phages Almeida,G.Md.F., Ravantti,J., Grdzelishvili,N., Kakabadze,E., Bakuradze,N., Javakhisvili,E., Megremis,S., Chanisvili,N., Papadopoulos,N. and Sundberg,L.-R. — — GenBank