Protein

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Genbank accession
WWQ72076.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTVETTDSIVEYTGNGVTTAFPVPFEFPANEDLVVTQVYNDVSTVLVLGTDYLVVGAGAQAGGAVITTVAPPIGAVINISRELEALQKTDLRNQGRYFAETHESVFDYLTMLIQQGFSGLSRALRRPLGKDYFDAEGRRIANVANPSDNQDAANKQWTEQYVGSVVGGIQGPINNAANILYLYPDGTPHVVQDLSKSDGASGIGWKQRTVADRLNDTANVKDYGAIADGAYHPLSERFATLAEAQAVYPHATALTDSIDWAACQAALNSGGIVDFSGNPRNYNINRDLVVTADGTTLLLRKCAFTASPSFSGVMMLDIRADNVSLLGGANFHAANMPRPAADFSTSSFIGFVIGQKGTEDNVYSGLNVTGGAILVNDGPAAAIGLQYCTDFHIDNVYGYYCDNSESYVGPGVIYFNRCTKYSVREVGASNFKWKGLYNANGSDFSVDTVFCTDGVEDQAAIFFAMCNGFEANQLQSRKSFGVKLDRCNDFSCSGIHANCNDIGQIGVMIQGCIGYSLNQVFVRGYAIAGVEVSYHPGPPAANALVGVVNGFEIRNGKSGSLAALRIFGSTTETVGQLQISGGYIYSCSRGIVVRNVGSSVLNRQFSVKDVVVDTFDVAGIEGVSREMSIRGVEFFNVSSSAVACIDLHHEPGQTCDFVSISNCSTGNVPSGVNFIRAVSTTTRRLKIGDVMISGCTFKGGARLLDLAMTQTDDYVRTLSVFGNTHNGASSGTSVGLGNSATTGNTQVSIIGNMLLGTSLAKVAINFVETAASGRWNGVVENNMAKINNKPNNV
Physico‐chemical
properties
protein length:793 AA
molecular weight: 84192,25690 Da
isoelectric point:5,11292
aromaticity:0,08827
hydropathy:-0,00340

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWQ72076.1
1 793
Domain Start End Length (AA) Confidence
N-terminal 1 257 257 0,9966
Central domain 258 782 526 0,9962
C-terminal 783 793 10 0,4615
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-257
Central
258-782
C-terminal
783-793

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Shamal
[NCBI] 		3097009 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWQ72076.1 [NCBI]
Genbank nucleotide accession
OR683409.1 [NCBI]
CDS location
range 40342 -> 42723
strand +
CDS
TTGACCGTCGAAACTACTGATAGCATTGTTGAGTACACAGGTAACGGGGTGACCACGGCATTCCCTGTTCCGTTTGAGTTCCCGGCTAACGAGGATCTTGTTGTTACGCAGGTCTACAACGATGTGTCGACGGTCCTTGTGCTTGGTACGGACTATCTCGTTGTCGGTGCAGGCGCTCAGGCTGGCGGTGCTGTTATCACCACTGTGGCTCCGCCAATCGGCGCAGTGATCAACATCTCAAGGGAACTTGAGGCGCTTCAAAAAACCGACCTGAGAAACCAGGGTAGGTATTTTGCTGAAACACATGAGAGCGTATTTGACTACCTGACGATGCTGATTCAGCAAGGTTTCTCTGGCCTGTCCCGTGCGCTGCGTCGGCCCCTCGGCAAAGACTACTTCGACGCGGAAGGACGGAGGATTGCCAATGTTGCAAATCCTTCCGATAACCAAGATGCAGCAAATAAGCAATGGACCGAGCAGTATGTGGGCAGTGTCGTAGGAGGGATTCAGGGCCCTATCAATAATGCCGCCAATATCCTCTATCTTTACCCGGACGGCACGCCCCACGTTGTGCAAGACCTTTCCAAGTCGGATGGCGCTAGCGGGATCGGATGGAAGCAGCGCACCGTAGCCGACCGCCTGAACGATACTGCGAACGTCAAGGACTACGGCGCTATCGCAGACGGGGCTTATCACCCGTTGTCAGAGCGGTTCGCTACGCTCGCCGAGGCGCAGGCGGTCTATCCGCACGCCACTGCGCTGACCGACAGTATCGACTGGGCGGCGTGCCAGGCAGCACTGAATTCTGGAGGTATTGTTGATTTCAGCGGAAACCCGAGAAACTACAATATAAATAGGGACTTAGTAGTTACTGCTGATGGAACTACGTTACTTTTGCGTAAATGTGCGTTCACCGCATCGCCATCTTTCAGTGGCGTAATGATGCTTGATATTAGGGCTGATAATGTGAGCCTGCTCGGTGGCGCAAACTTTCATGCCGCCAATATGCCAAGGCCGGCAGCGGATTTTTCCACCTCCAGCTTTATTGGATTCGTCATAGGTCAGAAAGGCACCGAGGATAACGTTTACTCTGGACTGAATGTGACAGGCGGGGCCATCTTGGTAAACGATGGGCCTGCCGCAGCAATTGGTTTGCAATACTGCACGGACTTCCATATAGACAACGTCTATGGGTATTACTGTGACAACTCTGAGTCGTATGTTGGCCCCGGTGTAATCTACTTTAACCGTTGCACTAAGTACAGCGTCAGAGAGGTTGGGGCTTCTAATTTCAAATGGAAGGGGCTCTATAATGCGAACGGTTCTGACTTCTCTGTTGATACAGTCTTTTGCACAGATGGAGTAGAAGATCAAGCAGCCATCTTCTTCGCTATGTGTAACGGGTTCGAGGCAAATCAACTACAATCTAGAAAGAGCTTTGGGGTAAAGCTAGATAGATGCAACGACTTCTCATGCAGTGGCATCCATGCAAACTGTAATGATATCGGTCAAATAGGTGTGATGATTCAGGGCTGTATTGGATATAGTCTTAATCAAGTTTTTGTAAGAGGTTATGCTATAGCGGGAGTTGAGGTAAGTTACCATCCAGGCCCTCCGGCAGCAAACGCCTTGGTCGGGGTGGTCAACGGATTTGAAATTAGAAATGGAAAATCCGGCTCTCTGGCTGCATTGAGAATTTTTGGTTCAACTACGGAAACTGTAGGTCAACTCCAAATTTCTGGCGGATATATATACTCATGCTCTCGCGGGATTGTAGTAAGAAATGTAGGTTCGTCTGTTCTGAATAGACAATTTTCGGTTAAGGATGTTGTTGTAGATACTTTTGATGTTGCCGGGATTGAAGGCGTTTCGCGCGAGATGTCAATCCGTGGCGTTGAGTTCTTCAACGTTTCGTCATCCGCCGTTGCATGCATTGACCTACATCATGAGCCTGGGCAGACCTGCGATTTTGTCTCGATAAGCAATTGCTCTACAGGGAATGTTCCGTCAGGAGTTAACTTCATTAGGGCAGTAAGCACAACCACGCGCAGACTAAAAATTGGTGACGTGATGATCAGCGGCTGCACATTTAAAGGTGGCGCTCGACTACTTGACCTGGCTATGACGCAAACAGACGACTATGTTCGGACGCTAAGTGTCTTTGGAAACACCCACAACGGAGCGTCAAGCGGAACCTCAGTTGGTCTTGGAAATTCCGCCACAACTGGAAATACGCAGGTAAGCATTATTGGTAATATGCTTCTTGGTACATCACTAGCAAAGGTGGCAATTAATTTTGTTGAAACTGCCGCCTCTGGTCGCTGGAATGGGGTTGTAGAGAACAACATGGCTAAAATAAACAACAAGCCTAACAATGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
938f8bad8f1cc481800a5fcc47707759d1be70388c7468b516d79b39046e9e19
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8565
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages of P. aeruginosa: insights into their role through their activity, abundance and persistence Kyrkou,I., Bartell,J.A., Lechuga,A., Lood,C., Lavigne,R., Molin,S. and Krogh Johansen,H. 2024-01-16 — GenBank