Protein

Genbank accession
APD21368.1 [GenBank]
Protein name
tail collar domain-containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,73
Protein sequence
MPRDSNGNTNPLQGTIVQTGDTILPSQHNPALVDLYAMMTQSLSRDGQGGMRANLAMNGFQVTGLGNATQPGNAVPLSQFQSGTPVGAVIDYAGVNPPNTWQFCFGQAIEVSAYPDFVAACYVGNALNATAGFGYRTTSQTDPSNNRSTSGQFIVLPDLRGRVGAGKDDMGGSAANRVTTTGSGINGALIGSNGGEQNSTLTIYQIPNHDHGGSTGNGVGSYTILNVLKNLTGNLSLSRNGQVGFTNENIPFSTHNHPISPQGGGLPHNNMQPTVIINKIIKVSY
Physico‐chemical
properties
protein length:285 AA
molecular weight: 29651,51390 Da
isoelectric point:6,57027
aromaticity:0,06316
hydropathy:-0,30175

Domains

Domains [InterPro]
SSF88874
81–283
SSF88874
IPR037053
83–164
IPR037053
APD21368.1
1 285
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Brucella phage Iz
[NCBI] 		1920338 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD21368.1 [NCBI]
Genbank nucleotide accession
KY056619 [NCBI]
CDS location
range 19807 -> 20664
strand +
CDS
ATGCCAAGAGACAGCAACGGCAACACCAATCCACTGCAAGGGACTATCGTTCAAACCGGCGATACTATTCTGCCATCTCAGCACAACCCAGCGTTAGTTGATCTTTATGCAATGATGACGCAAAGCCTTAGCCGGGATGGGCAAGGTGGTATGCGCGCTAATCTTGCAATGAATGGGTTTCAGGTTACGGGATTAGGCAACGCTACCCAGCCGGGAAATGCAGTTCCATTGTCTCAGTTTCAGTCTGGTACTCCTGTGGGCGCAGTCATTGATTATGCTGGCGTTAACCCGCCTAATACGTGGCAATTTTGCTTTGGGCAAGCGATCGAAGTTTCAGCATATCCCGATTTCGTAGCAGCTTGCTATGTTGGTAATGCACTCAATGCCACGGCAGGATTTGGATATCGAACCACTTCACAGACTGATCCATCTAATAATAGGTCCACGTCTGGACAGTTTATTGTTTTGCCTGATTTGAGGGGCAGGGTAGGTGCTGGTAAGGATGACATGGGGGGTAGCGCTGCAAACCGTGTTACTACCACTGGAAGTGGGATTAATGGGGCTTTGATAGGTTCTAATGGTGGTGAGCAAAATAGTACACTAACAATATATCAAATTCCCAATCATGACCACGGTGGCAGTACAGGAAATGGGGTTGGTAGCTATACAATACTAAATGTACTCAAGAACTTAACTGGTAATTTAAGTTTGAGTAGAAATGGTCAAGTAGGTTTTACAAATGAAAATATACCATTTTCAACTCATAATCATCCTATAAGCCCACAAGGTGGAGGCTTGCCTCATAACAACATGCAGCCTACCGTAATAATCAACAAAATTATCAAGGTGTCTTACTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3bef9e38bf023dcbfd296f11e73da83dbb43e127f8f822f0266f0500cf70b77e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7122
Evidence 0,7122
Download PDB

Literature

Title Authors Date PMID Source
Genetic Diversity of Brucella Reference and Non-reference Phages and Its Impact on Brucella-Typing Hammerl,J.A., Gollner,C., Jackel,C., Scholz,H.C., Nockler,K., Reetz,J., Al Dahouk,S. and Hertwig,S. 2017 28360895 GenBank