Protein

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Genbank accession
QOE32164.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTLHTRQSGAWAKVNGLFIRQSGVWTPVKNAYVRDGGVWKVYYSSEIVVNVTTSQTGLVLSTLFSSADWISATPKRVVIQSGVVIGGAAWGALASKAGQTPGNEWGGILTLDNYGIIQGRGGIPNSGIGGSALYEDTITWTKKCIVNNFGTIRAGGGAGGVGGAGSTSTPVSEGPYYGSVNGTNHLWSQPYYNGSAVGAPDVTWAGVAISAPAGTANTATSFTVGIYTYTRGAIRSQNGRPMPIPWQWEVSRSYQSTVATAGGTGGRGQGSDGAAAAGAAGGANAGNGGPGGNWGIQGGTGNTGNAGAGAVGGLAGIAYNTANWSMTNTGTIQGRVT
Physico‐chemical
properties
protein length:337 AA
molecular weight: 33819,94750 Da
isoelectric point:9,64584
aromaticity:0,08902
hydropathy:-0,10742

Domains

Domains [InterPro]
DC_1762
ATT
1–165
DC_1762 DC_0422
IPR007932
RBD
46–175
IPR007932
QOE32164.1
1 337
Architecture
ATT
RBD
RBD
ATT 1-165 | RBD 166-175 | RBD 195-337
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage Paso
[NCBI] 		2767574 Uroviricota > Caudoviricetes > Autographivirales > Pasovirus > Pasovirus paso
Host Bradyrhizobium japonicum
[NCBI] 		375 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOE32164.1 [NCBI]
Genbank nucleotide accession
MT708546.1 [NCBI]
CDS location
range 39880 -> 40893
strand +
CDS
ATGACCCTACACACTCGTCAATCGGGTGCATGGGCGAAGGTAAACGGGTTGTTCATCCGCCAATCTGGCGTATGGACGCCCGTCAAGAACGCTTATGTACGGGACGGTGGTGTCTGGAAAGTCTACTACTCGTCCGAAATCGTCGTGAACGTCACGACCAGTCAGACAGGACTTGTTCTGTCAACCCTATTCAGTTCAGCAGACTGGATATCTGCTACGCCTAAGCGCGTGGTCATCCAGTCTGGTGTAGTAATCGGTGGTGCTGCATGGGGTGCTCTAGCTTCGAAGGCTGGACAAACTCCGGGCAACGAGTGGGGTGGTATACTCACGCTCGACAATTATGGCATTATCCAAGGGCGAGGCGGTATCCCCAACTCTGGTATTGGTGGATCGGCCTTGTACGAGGACACGATTACTTGGACCAAGAAGTGTATCGTCAATAACTTCGGTACTATCCGCGCAGGCGGTGGTGCGGGTGGTGTTGGTGGTGCAGGTAGCACATCCACGCCAGTGTCGGAGGGACCATACTACGGTTCCGTAAACGGCACTAACCATTTGTGGAGCCAGCCGTACTACAACGGCTCAGCCGTGGGTGCACCGGATGTCACGTGGGCTGGTGTTGCTATATCCGCCCCGGCTGGTACTGCAAACACAGCTACGTCTTTCACGGTCGGTATCTACACGTATACTAGGGGCGCTATTCGCAGTCAGAACGGCAGACCCATGCCTATCCCATGGCAGTGGGAGGTTTCCCGGTCTTATCAGTCCACTGTGGCTACTGCTGGCGGAACGGGTGGTCGAGGTCAAGGCTCCGATGGTGCAGCCGCTGCTGGCGCAGCAGGCGGCGCAAATGCCGGTAACGGCGGTCCCGGTGGAAATTGGGGCATACAAGGCGGCACAGGCAACACAGGCAATGCTGGTGCTGGTGCAGTCGGTGGACTTGCGGGTATCGCATACAACACAGCGAATTGGTCCATGACCAATACGGGAACCATACAGGGCAGAGTGACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2eec8186572df9f995f3cf1ab5fa7f92366baa496819c099eb61722a55da54c5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9033
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Rhizobium japonicum phage Paso McBee,D.B., Ravindran,A., Newkirk,H., Gonzalez,C., Young,R. and Liu,M. 2021-02-04 — GenBank