Protein

View in Explore
Genbank accession
XDR03663.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTKSVITGSKGGSQKPYTPKEMEDNLISINKIKVLLAVSDGECDPDFSLKDLYLNDVPVMNADNSLNYQGVTAEFRPGTQTQSYIQGFTDTASEVTVSRDVTTQTPFVIPVTNRNLSAIRIKMMMPQGVKVENNGDRVGVEVTYRVDMAVDGGAYEEVLTDTFTGKTTSGYDRSRRIDLPEFNEQVLLRVSRLTADSTTDRVIDKIRLQSYAEVIDAKFRYPLTGLVYVEFDSELFPTQIPNISVKKKWKIINVPSNYDPIGRTYNGVWDGVWKKAWTNNPAFILYDLITNQRYGLDQRELGIALDKWSIYQAAQYCDQMVPDGKGGLEPRYLCDVVIQSQIEAYQLIRDICSIFRGMSFWNGESLSIVVDMPREPSYIFTNDNVVNGDFSYTFASEKSMYTQCNVTFDDEQNMYQQDVEGVFEPESALRFGYNPTSITAIGCTRRSEANRRGRWILKTNLRSTTVNFATGLEGMIPSIGDVVAISDNFWSSNLMLNLSGRVQEVSGLQVFVPFKIDARPGDFIVINKPDGKPVKRTIANVSADGKTIELNVGFGFDVQPDTVFAIDRTDLALQQYVVTTITKGDNEEEFTYSITAVEYDPNKYDEIDYGVNIDDRPTSIVQPDVLQAPENVQVSSYSRVVQGMSVETMHISWDKVPYASLYEVQWRKDNGNWHNIPQTANKETEVEGIYAGVYHVRVRTVSASGSASPWSKIVTASLTGKVGKPLTPINLTASDDETFGIRVKWGMPEGASDTAYIELQQAPNAGDLPAEDQASLLSLVPYPQREYWHSILPAGFINWYRVRSVDKIGNVSDWTDFVRGMASTNVDDIIGDILDDIWNTPGGEAIKESAIDSANKIKDQAQSILQNALANDTEMRWTIKENGKRKAEYGHAVELIATESEARATQIEELRATIDDEVTASIKTVQEALANESETRATQVQQLDTKFTKEIDGVKQSTAASIGKVEQAISNESEARAQAVQNLDAKFTKQIGDLDEVIEQEVTANIAKVEQAIANESEARAKADQALTTKIGSVESAVAQKVDSWVNASGAGAQYSVKLGLTYQGKQYDAGMVLSLTGSGSAVKSQVLFDAARFGILTKVGGAYSLPFVVENNQVFINSLLVKNGSITNAMIGNEIKSNNYVAGQTGWRLDKNGNLEINGKTGTGRLTINNNLIQIYDANNRLRVRMGLW
Physico‐chemical
properties
protein length:1190 AA
molecular weight: 131833,23590 Da
isoelectric point:4,82503
aromaticity:0,08487
hydropathy:-0,34958

Domains

Domains [InterPro]
DC_0014
STR
1–1190
DC_0014
IPR053171
Unmapped
3–871
IPR053171 Coil IPR015406
IPR055385
ATT
92–217
IPR055385 IPR032876 IPR036116 Coil
IPR013783
STR
627–720
IPR013783
IPR003961
STR
628–716
IPR003961
IPR003961
STR
628–722
IPR003961
XDR03663.1
1 1190
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-217 | STR 218-340 | ATT 341-488 | STR 489-1190
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDR03663.1
1 1190
Domain Start End Length (AA) Confidence
N-terminal 1 508 508 0,9349
Central domain 509 1140 633 0,0328
C-terminal 1141 1190 49 0,7456
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-508
Central
509-1140
C-terminal
1141-1190

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KM5a1-KLB26
[NCBI] 		3143165 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp. M5a1
[NCBI] 		2759708 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Klebsiella >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDR03663.1 [NCBI]
Genbank nucleotide accession
PP556865.1 [NCBI]
CDS location
range 16522 -> 20094
strand +
CDS
ATGACTAAAAGTGTGATAACGGGCAGTAAGGGCGGATCGCAAAAGCCCTACACGCCAAAGGAAATGGAAGATAACCTGATTTCCATCAACAAAATCAAAGTGTTACTTGCCGTTTCAGATGGTGAGTGTGACCCTGATTTCTCGTTGAAAGACCTGTATTTAAACGATGTGCCAGTGATGAATGCTGACAACTCGCTCAACTACCAGGGCGTAACCGCAGAGTTTCGACCAGGTACGCAGACGCAAAGTTACATTCAGGGTTTCACCGACACCGCAAGCGAGGTTACAGTTTCGCGCGACGTGACCACACAAACGCCGTTTGTGATTCCGGTTACTAACCGCAACCTTTCCGCAATCCGAATCAAAATGATGATGCCGCAGGGCGTGAAGGTTGAGAACAACGGCGACCGTGTAGGCGTTGAGGTTACTTATCGCGTTGACATGGCGGTTGATGGTGGCGCATACGAGGAAGTGCTAACGGACACTTTCACAGGCAAGACAACGAGCGGCTACGACCGCAGCCGTCGAATTGACCTGCCGGAATTTAACGAGCAAGTATTGTTGCGCGTTAGCCGTTTAACCGCCGATAGCACAACGGATCGCGTTATCGACAAAATCCGGTTGCAGAGTTACGCCGAAGTTATCGACGCAAAGTTTCGTTATCCGCTGACTGGTTTAGTTTACGTTGAGTTTGACAGCGAGCTATTCCCGACGCAGATCCCGAATATTTCCGTTAAAAAGAAATGGAAGATCATAAACGTACCGTCGAACTATGATCCAATCGGGCGCACTTATAACGGCGTGTGGGATGGAGTCTGGAAAAAGGCGTGGACGAATAACCCCGCTTTCATCCTGTATGACTTGATCACCAATCAGCGCTACGGACTCGACCAACGCGAATTGGGAATTGCCCTGGACAAGTGGAGCATCTACCAGGCCGCGCAATACTGCGATCAGATGGTTCCAGACGGCAAAGGCGGATTAGAGCCGCGCTATCTGTGCGACGTTGTGATCCAGAGCCAGATTGAGGCTTATCAGCTTATCCGTGATATTTGCTCAATCTTCCGTGGTATGAGTTTTTGGAACGGCGAGAGCCTTTCTATCGTTGTGGATATGCCGCGCGAGCCGTCCTATATTTTCACTAATGACAACGTGGTTAACGGCGATTTCAGCTACACGTTTGCAAGTGAGAAATCAATGTACACGCAGTGCAACGTGACATTTGACGACGAGCAAAACATGTATCAGCAGGACGTGGAGGGCGTTTTCGAACCGGAGTCTGCCTTACGCTTTGGCTACAATCCGACGAGCATCACAGCGATTGGATGCACGCGACGCAGCGAGGCGAACCGCCGAGGGCGCTGGATTCTGAAAACAAACTTGCGCAGCACAACGGTAAACTTTGCTACAGGCCTGGAAGGTATGATCCCGTCCATCGGTGACGTGGTGGCGATTTCGGACAACTTCTGGAGCAGCAACCTAATGCTCAATCTATCGGGCAGGGTGCAGGAGGTTTCCGGTTTGCAGGTGTTTGTGCCTTTCAAAATCGACGCGCGGCCAGGTGATTTCATTGTGATCAACAAGCCGGACGGGAAGCCAGTAAAACGCACTATCGCCAACGTGAGCGCAGACGGAAAAACCATTGAACTAAACGTGGGATTCGGTTTCGACGTGCAGCCCGACACGGTGTTTGCTATTGACCGCACAGACCTTGCATTGCAGCAATACGTTGTGACGACAATCACCAAAGGCGACAATGAGGAGGAATTTACCTACTCAATCACGGCGGTAGAATACGATCCGAACAAGTACGACGAAATCGACTACGGCGTAAACATCGACGACCGCCCGACTTCAATCGTACAGCCGGACGTGCTGCAAGCGCCGGAAAACGTCCAGGTGTCGTCTTACTCTCGCGTTGTGCAGGGTATGAGCGTTGAAACAATGCATATCAGTTGGGATAAAGTGCCATACGCTAGCCTGTACGAGGTGCAGTGGCGCAAGGATAATGGCAACTGGCACAACATACCGCAGACAGCGAACAAGGAAACAGAGGTTGAGGGGATTTATGCGGGTGTTTATCACGTCCGAGTGCGCACGGTTTCCGCTTCCGGTTCCGCGTCGCCGTGGTCTAAGATTGTCACCGCATCGCTGACGGGTAAAGTAGGCAAGCCGTTAACGCCTATCAATCTGACAGCCTCCGACGACGAGACGTTTGGGATTCGCGTTAAATGGGGTATGCCAGAGGGCGCAAGCGACACGGCCTATATTGAGTTGCAGCAAGCGCCAAACGCCGGAGATTTACCAGCAGAAGATCAGGCATCGCTTTTAAGCCTGGTGCCTTATCCGCAGCGCGAATATTGGCACAGCATTTTGCCAGCAGGTTTTATAAACTGGTATCGCGTGCGCAGCGTTGACAAGATCGGTAACGTGTCGGATTGGACGGACTTTGTGCGCGGCATGGCATCCACAAACGTTGACGATATCATTGGTGATATTTTAGACGATATTTGGAACACGCCAGGCGGCGAGGCAATCAAGGAAAGCGCCATCGACAGCGCAAACAAGATCAAAGACCAGGCGCAAAGCATCTTGCAAAACGCGCTGGCTAACGATACGGAAATGCGCTGGACGATTAAGGAGAACGGGAAGCGCAAAGCGGAGTACGGTCACGCCGTGGAGCTTATCGCTACGGAATCCGAAGCGCGAGCAACGCAGATTGAAGAACTGCGAGCCACGATTGACGATGAAGTTACGGCAAGCATCAAAACCGTTCAGGAAGCGCTAGCGAACGAATCCGAAACGCGAGCAACGCAGGTGCAGCAGCTTGACACTAAATTCACCAAAGAGATTGACGGCGTGAAGCAAAGCACGGCGGCAAGCATTGGGAAGGTAGAGCAAGCGATTTCTAACGAGTCGGAAGCACGAGCGCAAGCGGTGCAGAACCTCGACGCGAAATTCACAAAGCAGATTGGCGATCTGGACGAGGTGATCGAGCAGGAAGTTACCGCAAACATCGCCAAAGTTGAGCAAGCAATTGCGAATGAGTCAGAGGCCAGGGCGAAAGCTGACCAGGCGTTGACCACGAAGATCGGAAGCGTTGAATCGGCGGTTGCGCAGAAAGTTGACTCATGGGTTAACGCAAGCGGAGCGGGTGCGCAGTATTCCGTTAAGCTGGGTTTAACGTACCAGGGCAAGCAATACGATGCGGGAATGGTCTTATCGCTTACTGGAAGCGGTAGCGCGGTTAAATCTCAAGTGCTTTTCGATGCGGCACGATTTGGCATTCTAACGAAAGTCGGCGGCGCTTACTCACTGCCTTTCGTGGTTGAAAACAACCAGGTATTCATTAACAGCCTGTTAGTGAAAAACGGCTCAATCACAAACGCAATGATCGGGAACGAAATCAAGTCAAACAACTATGTTGCAGGTCAAACAGGCTGGAGACTTGATAAAAACGGAAACCTGGAAATCAACGGAAAGACGGGAACCGGACGACTCACGATCAACAACAACCTGATCCAGATTTACGACGCAAACAACAGATTGCGCGTGAGAATGGGATTGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b6ce990cd90c87f33d638077ec3877c9a84806a3167cc540ed6c6e6c280ca298
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7635
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of 24 phages infecting the plant-growth-promoting rhizobacterium Klebsiella sp. M5a1 Gittrich,M.R., Sanderson,C.M. and Sullivan,M.B. 2025-02-21 — GenBank